BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032570
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624492.1| Pentatricopeptide repeat-containing protein ...    36   1e-06
ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...    35   5e-06
ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat...    35   5e-06

>ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499507|gb|AES80710.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score = 35.8 bits (81), Expect(3) = 1e-06
 Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = -1

Query: 221 KVLAYSWFEVKHKTHMFSSSTPL-PQRR 141
           KV AYSW E+KHKTH+F+++    PQ R
Sbjct: 738 KVPAYSWVEIKHKTHVFTANDKTHPQMR 765



 Score = 30.8 bits (68), Expect(3) = 1e-06
 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = -3

Query: 384 QELGRMIADRLFNMD-LKDAGPYVIM*N 304
           QEL +  A++LFNM  L+DA PYV M N
Sbjct: 686 QELAKKAANQLFNMKVLRDAAPYVTMSN 713



 Score = 29.6 bits (65), Expect(3) = 1e-06
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = -2

Query: 277 GKWNDVGEVMKFMRE*GVKR 218
           G+W++VG+V K MRE GVK+
Sbjct: 719 GEWDNVGKVKKAMRERGVKK 738


>ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g01510-like [Cucumis
           sativus]
          Length = 816

 Score = 35.0 bits (79), Expect(3) = 5e-06
 Identities = 13/20 (65%), Positives = 18/20 (90%)
 Frame = -1

Query: 221 KVLAYSWFEVKHKTHMFSSS 162
           KV AYSW E+KH+TH+FS++
Sbjct: 680 KVPAYSWVEIKHQTHVFSAN 699



 Score = 33.9 bits (76), Expect(3) = 5e-06
 Identities = 17/27 (62%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
 Frame = -3

Query: 381 ELGRMIADRLFNM-DLKDAGPYVIM*N 304
           EL +  ADRLFNM DL+DA PY+ M N
Sbjct: 629 ELAKKAADRLFNMEDLRDAAPYINMSN 655



 Score = 25.0 bits (53), Expect(3) = 5e-06
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = -2

Query: 277 GKWNDVGEVMKFMRE*GVKR 218
           G+W++V +V K MR+ GV++
Sbjct: 661 GQWDNVAKVKKAMRDRGVRK 680


>ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Cucumis sativus]
          Length = 816

 Score = 35.0 bits (79), Expect(3) = 5e-06
 Identities = 13/20 (65%), Positives = 18/20 (90%)
 Frame = -1

Query: 221 KVLAYSWFEVKHKTHMFSSS 162
           KV AYSW E+KH+TH+FS++
Sbjct: 680 KVPAYSWVEIKHQTHVFSAN 699



 Score = 33.9 bits (76), Expect(3) = 5e-06
 Identities = 17/27 (62%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
 Frame = -3

Query: 381 ELGRMIADRLFNM-DLKDAGPYVIM*N 304
           EL +  ADRLFNM DL+DA PY+ M N
Sbjct: 629 ELAKKAADRLFNMEDLRDAAPYINMSN 655



 Score = 25.0 bits (53), Expect(3) = 5e-06
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = -2

Query: 277 GKWNDVGEVMKFMRE*GVKR 218
           G+W++V +V K MR+ GV++
Sbjct: 661 GQWDNVAKVKKAMRDRGVRK 680