BLASTX nr result

ID: Cimicifuga21_contig00032567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032567
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270595.2| PREDICTED: DNA primase small subunit-like [V...   214   6e-54
emb|CBI34473.3| unnamed protein product [Vitis vinifera]              203   1e-50
gb|EEC79056.1| hypothetical protein OsI_19620 [Oryza sativa Indi...   196   1e-48
ref|XP_004141619.1| PREDICTED: DNA primase small subunit-like [C...   195   4e-48
ref|XP_003572504.1| PREDICTED: DNA primase small subunit-like [B...   194   6e-48

>ref|XP_002270595.2| PREDICTED: DNA primase small subunit-like [Vitis vinifera]
          Length = 457

 Score =  214 bits (545), Expect = 6e-54
 Identities = 100/126 (79%), Positives = 110/126 (87%), Gaps = 3/126 (2%)
 Frame = -2

Query: 371 EEVTNGRDDMEVDGCENENR---LGNAVPEGFNANYLKVYYGKLFPHTDIFKWMSYGNDG 201
           EEV +GRD ME+DGCE E +     NAVP+GFNANYLKVYYGKLFPH+D+FKWMSYGNDG
Sbjct: 2   EEVDSGRDAMEIDGCEPEGQEKMRENAVPDGFNANYLKVYYGKLFPHSDLFKWMSYGNDG 61

Query: 200 KHPACDQSYFCRREFSFTLENDIYVRFQSFNSAVELEYSVKEKCPFKIDIGPVYSVDPAK 21
           KHPACDQSY  RREFSFTL +DIY+RFQSFNS  E+E S+KEKCPFKIDIGPVYSVDP K
Sbjct: 62  KHPACDQSYIGRREFSFTLADDIYLRFQSFNSVHEMENSIKEKCPFKIDIGPVYSVDPTK 121

Query: 20  RHAYAQ 3
           RHAYAQ
Sbjct: 122 RHAYAQ 127


>emb|CBI34473.3| unnamed protein product [Vitis vinifera]
          Length = 447

 Score =  203 bits (516), Expect = 1e-50
 Identities = 94/117 (80%), Positives = 103/117 (88%), Gaps = 3/117 (2%)
 Frame = -2

Query: 344 MEVDGCENENR---LGNAVPEGFNANYLKVYYGKLFPHTDIFKWMSYGNDGKHPACDQSY 174
           ME+DGCE E +     NAVP+GFNANYLKVYYGKLFPH+D+FKWMSYGNDGKHPACDQSY
Sbjct: 1   MEIDGCEPEGQEKMRENAVPDGFNANYLKVYYGKLFPHSDLFKWMSYGNDGKHPACDQSY 60

Query: 173 FCRREFSFTLENDIYVRFQSFNSAVELEYSVKEKCPFKIDIGPVYSVDPAKRHAYAQ 3
             RREFSFTL +DIY+RFQSFNS  E+E S+KEKCPFKIDIGPVYSVDP KRHAYAQ
Sbjct: 61  IGRREFSFTLADDIYLRFQSFNSVHEMENSIKEKCPFKIDIGPVYSVDPTKRHAYAQ 117


>gb|EEC79056.1| hypothetical protein OsI_19620 [Oryza sativa Indica Group]
           gi|222631272|gb|EEE63404.1| hypothetical protein
           OsJ_18216 [Oryza sativa Japonica Group]
          Length = 449

 Score =  196 bits (499), Expect = 1e-48
 Identities = 89/116 (76%), Positives = 101/116 (87%)
 Frame = -2

Query: 350 DDMEVDGCENENRLGNAVPEGFNANYLKVYYGKLFPHTDIFKWMSYGNDGKHPACDQSYF 171
           D ME+DG +++     AVP+GFNA+YL++YYGKLFPH D FKW+SYGNDGKHP CDQSY 
Sbjct: 9   DAMEIDG-QHQQVANTAVPDGFNADYLRIYYGKLFPHVDFFKWLSYGNDGKHPGCDQSYV 67

Query: 170 CRREFSFTLENDIYVRFQSFNSAVELEYSVKEKCPFKIDIGPVYSVDPAKRHAYAQ 3
            RREFSFTLENDIYVRFQSF+S  E+E S+KEKCPFKIDIGPVYSVDPAKRHAYAQ
Sbjct: 68  GRREFSFTLENDIYVRFQSFDSVAEMENSIKEKCPFKIDIGPVYSVDPAKRHAYAQ 123


>ref|XP_004141619.1| PREDICTED: DNA primase small subunit-like [Cucumis sativus]
           gi|449517297|ref|XP_004165682.1| PREDICTED: DNA primase
           small subunit-like [Cucumis sativus]
          Length = 450

 Score =  195 bits (495), Expect = 4e-48
 Identities = 91/125 (72%), Positives = 102/125 (81%)
 Frame = -2

Query: 380 MTKEEVTNGRDDMEVDGCENENRLGNAVPEGFNANYLKVYYGKLFPHTDIFKWMSYGNDG 201
           M    V NG  DM +DG  NE +  N V +GF+ANYLK+YYGKLFP+ D FKWMSYGNDG
Sbjct: 1   MVTAAVENGGSDMVIDG--NEQKPKNTVSDGFDANYLKIYYGKLFPYADFFKWMSYGNDG 58

Query: 200 KHPACDQSYFCRREFSFTLENDIYVRFQSFNSAVELEYSVKEKCPFKIDIGPVYSVDPAK 21
           KHP  DQSYF RREFSFTL+NDIY+RFQSFN+  E+E S+KEKCPFKIDIGPVYSVDPAK
Sbjct: 59  KHPGSDQSYFGRREFSFTLDNDIYLRFQSFNNLSEMEISIKEKCPFKIDIGPVYSVDPAK 118

Query: 20  RHAYA 6
           RHAYA
Sbjct: 119 RHAYA 123


>ref|XP_003572504.1| PREDICTED: DNA primase small subunit-like [Brachypodium distachyon]
          Length = 450

 Score =  194 bits (493), Expect = 6e-48
 Identities = 87/114 (76%), Positives = 99/114 (86%)
 Frame = -2

Query: 344 MEVDGCENENRLGNAVPEGFNANYLKVYYGKLFPHTDIFKWMSYGNDGKHPACDQSYFCR 165
           ME+DG + +  +  AVPEGFNA+YL++YYGKLFP+ D FKW+SYGND KHP CDQSY  R
Sbjct: 7   MEIDGQQQQREVAAAVPEGFNADYLRIYYGKLFPYGDFFKWLSYGNDAKHPGCDQSYIGR 66

Query: 164 REFSFTLENDIYVRFQSFNSAVELEYSVKEKCPFKIDIGPVYSVDPAKRHAYAQ 3
           RE SFTLENDIY+RFQSF+SA ELE S+KEKCPFKIDIGPVYSVDPAKRHAYAQ
Sbjct: 67  RELSFTLENDIYLRFQSFDSAAELESSIKEKCPFKIDIGPVYSVDPAKRHAYAQ 120


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