BLASTX nr result

ID: Cimicifuga21_contig00032555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032555
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530607.1| nuclear protein skip, putative [Ricinus comm...   132   4e-29
ref|NP_001237712.1| GAMYB-binding protein [Glycine max] gi|34512...   130   1e-28
ref|XP_004149509.1| PREDICTED: puff-specific protein Bx42-like [...   128   4e-28
ref|XP_004139354.1| PREDICTED: SNW domain-containing protein 1-l...   128   5e-28
ref|NP_001048184.1| Os02g0759800 [Oryza sativa Japonica Group] g...   126   2e-27

>ref|XP_002530607.1| nuclear protein skip, putative [Ricinus communis]
           gi|223529855|gb|EEF31787.1| nuclear protein skip,
           putative [Ricinus communis]
          Length = 360

 Score =  132 bits (331), Expect = 4e-29
 Identities = 69/111 (62%), Positives = 82/111 (73%), Gaps = 4/111 (3%)
 Frame = -1

Query: 324 SDQPVPPYLKRTAFIPRKPIDFGDGGAFPEIHVAQCPLGMGNRKPHKTQNSKILPLTVDA 145
           S +PVPPYL R  F+PRK  DFGDGGAFPEIH+AQ PLGMG  K  K   SKILPLTVDA
Sbjct: 43  SHKPVPPYLDRKGFVPRKVEDFGDGGAFPEIHIAQYPLGMGRDKSAKPA-SKILPLTVDA 101

Query: 144 QGNPTFDSIVKQNENATKIVYTRYKDLVP----NVSISIAEMDMEKMIEET 4
            GN  +D+IVKQNEN+ KIVY+++KDL+P    N   S  + D++K IEET
Sbjct: 102 HGNVAYDAIVKQNENSKKIVYSQHKDLIPKLLKNDEESDEDEDLQKEIEET 152


>ref|NP_001237712.1| GAMYB-binding protein [Glycine max] gi|345128628|gb|AAZ38969.2|
           GAMYB-binding protein [Glycine max]
          Length = 612

 Score =  130 bits (327), Expect = 1e-28
 Identities = 67/120 (55%), Positives = 81/120 (67%), Gaps = 11/120 (9%)
 Frame = -1

Query: 327 SSDQPVPPYLKRTAFIPRKPIDFGDGGAFPEIHVAQCPLGMGNRKPHKTQNSKILPLTVD 148
           +  +PVPPYLKR  F+PRK  DFGDGGAFPEIHVAQ PL MG  K      SKILP+TVD
Sbjct: 45  AKQKPVPPYLKRAGFVPRKIEDFGDGGAFPEIHVAQYPLDMGREKSGAKPGSKILPVTVD 104

Query: 147 AQGNPTFDSIVKQNENATKIVYTRYKDLVPN-----------VSISIAEMDMEKMIEETK 1
           A GN  +D+IV+QNENA KIVYT+ KDL+P            VS   A+  +E+ ++ETK
Sbjct: 105 ANGNVAYDAIVRQNENARKIVYTQQKDLIPKFLKNDEDDDDVVSDDEAQKQIEETMQETK 164


>ref|XP_004149509.1| PREDICTED: puff-specific protein Bx42-like [Cucumis sativus]
           gi|449523876|ref|XP_004168949.1| PREDICTED:
           puff-specific protein Bx42-like [Cucumis sativus]
          Length = 603

 Score =  128 bits (322), Expect = 4e-28
 Identities = 69/125 (55%), Positives = 87/125 (69%), Gaps = 14/125 (11%)
 Frame = -1

Query: 336 KRFSSDQ----------PVPPYLKRTAFIPRKPIDFGDGGAFPEIHVAQCPLGMGNRKPH 187
           +RFSS +          PVPPYLKR  F+PRK  DFGDGG+FPEIH+AQ PL MG  K  
Sbjct: 29  QRFSSSEAEQTSVIKVNPVPPYLKRGGFVPRKVEDFGDGGSFPEIHIAQYPLDMGRDKLS 88

Query: 186 KTQNSKILPLTVDAQGNPTFDSIVKQNENATKIVYTRYKDLVPNV----SISIAEMDMEK 19
           K   SKILP+TVDA GN  +D+IVKQNENA KIVY+++KDL+P +     +S  + +++K
Sbjct: 89  K-PGSKILPITVDALGNVAYDAIVKQNENAKKIVYSQHKDLIPKILKDDEMSDEDEELQK 147

Query: 18  MIEET 4
            IEET
Sbjct: 148 EIEET 152


>ref|XP_004139354.1| PREDICTED: SNW domain-containing protein 1-like [Cucumis sativus]
           gi|449487951|ref|XP_004157882.1| PREDICTED: SNW
           domain-containing protein 1-like isoform 1 [Cucumis
           sativus] gi|449487953|ref|XP_004157883.1| PREDICTED: SNW
           domain-containing protein 1-like isoform 2 [Cucumis
           sativus]
          Length = 605

 Score =  128 bits (321), Expect = 5e-28
 Identities = 68/125 (54%), Positives = 87/125 (69%), Gaps = 14/125 (11%)
 Frame = -1

Query: 336 KRFSSDQ----------PVPPYLKRTAFIPRKPIDFGDGGAFPEIHVAQCPLGMGNRKPH 187
           +RFSS +          PVPPYLKR+ F+PR+  DFGDGGAFPEIH+AQ PL MG  K  
Sbjct: 29  QRFSSSEAEQTSVVKANPVPPYLKRSGFVPRRVEDFGDGGAFPEIHIAQYPLDMGRDKSS 88

Query: 186 KTQNSKILPLTVDAQGNPTFDSIVKQNENATKIVYTRYKDLVPNVSISIAEM----DMEK 19
           K   SKILP+TVDA GN  +D+IVKQNEN+ KIVY+++KDL+P +  +  E     D++K
Sbjct: 89  K-PGSKILPVTVDAHGNVAYDAIVKQNENSKKIVYSQHKDLIPKILKNDEESDEGEDLQK 147

Query: 18  MIEET 4
            I+ET
Sbjct: 148 EIDET 152


>ref|NP_001048184.1| Os02g0759800 [Oryza sativa Japonica Group]
           gi|47497360|dbj|BAD19399.1| putative GAMYB-binding
           protein [Oryza sativa Japonica Group]
           gi|113537715|dbj|BAF10098.1| Os02g0759800 [Oryza sativa
           Japonica Group] gi|125541209|gb|EAY87604.1| hypothetical
           protein OsI_09015 [Oryza sativa Indica Group]
           gi|125583761|gb|EAZ24692.1| hypothetical protein
           OsJ_08462 [Oryza sativa Japonica Group]
          Length = 607

 Score =  126 bits (316), Expect = 2e-27
 Identities = 64/110 (58%), Positives = 82/110 (74%), Gaps = 5/110 (4%)
 Frame = -1

Query: 318 QPVPPYLKRTAFIPRKPIDFGDGGAFPEIHVAQCPLGMGNRKPHKTQNSKILPLTVDAQG 139
           +PVPPY KR  F+PR+P DFGDGGAFPEIHVAQ PLGMG R   +   SKIL LTVDA+G
Sbjct: 52  KPVPPYGKRGGFVPRRPEDFGDGGAFPEIHVAQYPLGMGRR--DEKGGSKILALTVDAKG 109

Query: 138 NPTFDSIVKQNENATKIVYTRYKDLVPNVSISIAEM-----DMEKMIEET 4
           +  FD++VKQ ENA+KIVY+++ DLVP ++ + +E      + +K IEET
Sbjct: 110 SVAFDAVVKQGENASKIVYSKHSDLVPKIATADSEATADDEEYQKQIEET 159


Top