BLASTX nr result
ID: Cimicifuga21_contig00032543
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00032543
(336 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containi... 200 1e-49
emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera] 200 1e-49
ref|XP_002320672.1| predicted protein [Populus trichocarpa] gi|2... 183 1e-44
ref|XP_002530602.1| pentatricopeptide repeat-containing protein,... 183 1e-44
ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containi... 180 1e-43
>ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 200 bits (508), Expect = 1e-49
Identities = 93/111 (83%), Positives = 105/111 (94%)
Frame = -2
Query: 335 SEAKKVFEEIPEPDLVLWNTMISGYSQNEKFSEDALDCFRRMQRVGYHPDDCSFVCVISA 156
S+ +KVFEEI EPDLVLWNTM+SGYSQNE+F EDAL+CFR+MQ +GY P+DCSFVCVISA
Sbjct: 293 SDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISA 352
Query: 155 CSNLSSPSQGKQLHSLALKSDIPMNRISVNNALVAMYSKCGNLQDARRLFE 3
CSNLSSPSQGKQ+HSLALKSDIP NRISV+NAL+AMYSKCGNLQDARRLF+
Sbjct: 353 CSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFD 403
Score = 71.6 bits (174), Expect = 6e-11
Identities = 44/108 (40%), Positives = 66/108 (61%)
Frame = -2
Query: 329 AKKVFEEIPEPDLVLWNTMISGYSQNEKFSEDALDCFRRMQRVGYHPDDCSFVCVISACS 150
A ++F++IPEPDLV +NT+IS Y+ + + AL F M+ +G D + VI+AC
Sbjct: 93 AHQLFDQIPEPDLVSYNTLISAYADCGE-TAPALGLFSGMREMGLDMDGFTLSAVITACC 151
Query: 149 NLSSPSQGKQLHSLALKSDIPMNRISVNNALVAMYSKCGNLQDARRLF 6
+ QLHS+A+ S + +SVNNAL+ Y K G+L DA+R+F
Sbjct: 152 D--DVGLIGQLHSVAVSSGFD-SYVSVNNALLTYYGKNGDLDDAKRVF 196
Score = 58.5 bits (140), Expect = 5e-07
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Frame = -2
Query: 332 EAKKVFEEIPE-PDLVLWNTMISGYSQNEKFSEDALDCFRRMQRVGYHPDDCSFVCVISA 156
+AK+VF + D V WN+MI Y Q+++ S+ AL F+ M R G + D + V++A
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSK-ALGLFQEMVRRGLNVDMFTLASVLTA 249
Query: 155 CSNLSSPSQGKQLHSLALKSDIPMNRISVNNALVAMYSKC-GNLQDARRLFE 3
+ L S G Q H +K+ N V + L+ +YSKC G + D R++FE
Sbjct: 250 FTCLEDLSGGLQFHGQLIKTGFHQNS-HVGSGLIDLYSKCGGGMSDCRKVFE 300
>emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 200 bits (508), Expect = 1e-49
Identities = 93/111 (83%), Positives = 105/111 (94%)
Frame = -2
Query: 335 SEAKKVFEEIPEPDLVLWNTMISGYSQNEKFSEDALDCFRRMQRVGYHPDDCSFVCVISA 156
S+ +KVFEEI EPDLVLWNTM+SGYSQNE+F EDAL+CFR+MQ +GY P+DCSFVCVISA
Sbjct: 293 SDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISA 352
Query: 155 CSNLSSPSQGKQLHSLALKSDIPMNRISVNNALVAMYSKCGNLQDARRLFE 3
CSNLSSPSQGKQ+HSLALKSDIP NRISV+NAL+AMYSKCGNLQDARRLF+
Sbjct: 353 CSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFD 403
Score = 71.6 bits (174), Expect = 6e-11
Identities = 44/108 (40%), Positives = 66/108 (61%)
Frame = -2
Query: 329 AKKVFEEIPEPDLVLWNTMISGYSQNEKFSEDALDCFRRMQRVGYHPDDCSFVCVISACS 150
A ++F++IPEPDLV +NT+IS Y+ + + AL F M+ +G D + VI+AC
Sbjct: 93 AHQLFDQIPEPDLVSYNTLISAYADCGE-TAPALGLFSGMREMGLDMDXFTLSAVITACC 151
Query: 149 NLSSPSQGKQLHSLALKSDIPMNRISVNNALVAMYSKCGNLQDARRLF 6
+ QLHS+A+ S + +SVNNAL+ Y K G+L DA+R+F
Sbjct: 152 D--DVGLIGQLHSVAVSSGFD-SYVSVNNALLTYYGKNGDLDDAKRVF 196
Score = 58.5 bits (140), Expect = 5e-07
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Frame = -2
Query: 332 EAKKVFEEIPE-PDLVLWNTMISGYSQNEKFSEDALDCFRRMQRVGYHPDDCSFVCVISA 156
+AK+VF + D V WN+MI Y Q+++ S+ AL F+ M R G + D + V++A
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSK-ALGLFQEMVRRGLNVDMFTLASVLTA 249
Query: 155 CSNLSSPSQGKQLHSLALKSDIPMNRISVNNALVAMYSKC-GNLQDARRLFE 3
+ L S G Q H +K+ N V + L+ +YSKC G + D R++FE
Sbjct: 250 FTCLEDLSGGLQFHGQLIKTGFHQNS-HVGSGLIDLYSKCGGGMSDCRKVFE 300
>ref|XP_002320672.1| predicted protein [Populus trichocarpa] gi|222861445|gb|EEE98987.1|
predicted protein [Populus trichocarpa]
Length = 720
Score = 183 bits (465), Expect = 1e-44
Identities = 86/111 (77%), Positives = 100/111 (90%)
Frame = -2
Query: 335 SEAKKVFEEIPEPDLVLWNTMISGYSQNEKFSEDALDCFRRMQRVGYHPDDCSFVCVISA 156
SE++KVFEEI DLV+WNTMISGYSQN++ S +AL+CFR+MQR GY PDDCSFVC ISA
Sbjct: 294 SESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISA 353
Query: 155 CSNLSSPSQGKQLHSLALKSDIPMNRISVNNALVAMYSKCGNLQDARRLFE 3
CSNLSSPSQGKQ H+LA+KS+IP N+ISVNNALV MYSKCGNLQDAR+LF+
Sbjct: 354 CSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQ 404
Score = 65.9 bits (159), Expect = 3e-09
Identities = 42/108 (38%), Positives = 63/108 (58%)
Frame = -2
Query: 329 AKKVFEEIPEPDLVLWNTMISGYSQNEKFSEDALDCFRRMQRVGYHPDDCSFVCVISACS 150
A +F++IP+PDLV +NT+I+ Y+ + AL F M+ +G D +F VI+AC
Sbjct: 93 AHHLFDQIPQPDLVSFNTLINAYADRGD-TLSALSLFGEMREMGLVMDGFTFSGVITACC 151
Query: 149 NLSSPSQGKQLHSLALKSDIPMNRISVNNALVAMYSKCGNLQDARRLF 6
N +QLHSLA S + +SV N+L+ YSK G L++A +F
Sbjct: 152 N--HVGLIRQLHSLAFSSGFD-SYVSVKNSLLTYYSKNGILEEAEMVF 196
Score = 57.8 bits (138), Expect = 9e-07
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Frame = -2
Query: 332 EAKKVFEEIPEP--DLVLWNTMISGYSQNEKFSEDALDCFRRMQRVGYHPDDCSFVCVIS 159
EA+ VF + E D V WN+MI Y Q+++ AL +R M G+ D + V++
Sbjct: 191 EAEMVFNGMGEEVRDEVSWNSMIVAYGQHKR-GLKALALYRDMVHRGFEIDMFTLASVLT 249
Query: 158 ACSNLSSPSQGKQLHSLALKSDIPMNRISVNNALVAMYSKCG-NLQDARRLFE 3
S + S G Q H+ A+K+ NR V + L+ MY+KCG + ++R++FE
Sbjct: 250 TFSCVEDLSGGLQFHAKAIKTGFNKNR-HVGSGLIDMYAKCGAGMSESRKVFE 301
>ref|XP_002530602.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223529850|gb|EEF31782.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 567
Score = 183 bits (464), Expect = 1e-44
Identities = 84/110 (76%), Positives = 98/110 (89%)
Frame = -2
Query: 332 EAKKVFEEIPEPDLVLWNTMISGYSQNEKFSEDALDCFRRMQRVGYHPDDCSFVCVISAC 153
+ +K+F EI EPDLVLWNTMIS YS +E+ SE+ LDCFRRMQR G+ PDDCSFVCVI AC
Sbjct: 295 DCRKIFVEIREPDLVLWNTMISAYSLDEELSEETLDCFRRMQRAGFRPDDCSFVCVIRAC 354
Query: 152 SNLSSPSQGKQLHSLALKSDIPMNRISVNNALVAMYSKCGNLQDARRLFE 3
SNLSSPSQGKQ+H++ +KS+IP N+ISVNNALVAMYSKCGNLQDARRLF+
Sbjct: 355 SNLSSPSQGKQIHAMTVKSEIPSNQISVNNALVAMYSKCGNLQDARRLFD 404
Score = 60.8 bits (146), Expect = 1e-07
Identities = 39/108 (36%), Positives = 62/108 (57%)
Frame = -2
Query: 329 AKKVFEEIPEPDLVLWNTMISGYSQNEKFSEDALDCFRRMQRVGYHPDDCSFVCVISACS 150
A+ +F++IP+PD + +NT+I+ Y+ S +AL FR M+ G D + VI+AC
Sbjct: 93 ARGLFDQIPQPDAISYNTLITAYADCGD-SLNALYLFREMRETGIDMDGYTLSGVITACC 151
Query: 149 NLSSPSQGKQLHSLALKSDIPMNRISVNNALVAMYSKCGNLQDARRLF 6
N + +QLH LA + + +SV N+ V Y K G L++A R+F
Sbjct: 152 N--DVNLIRQLHCLAGNYGLD-SYVSVKNSFVTYYGKNGFLEEAERVF 196
>ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 180 bits (456), Expect = 1e-43
Identities = 84/110 (76%), Positives = 95/110 (86%)
Frame = -2
Query: 332 EAKKVFEEIPEPDLVLWNTMISGYSQNEKFSEDALDCFRRMQRVGYHPDDCSFVCVISAC 153
E +KVFEEI PDLVLWNTMISG+SQ E SED + CFR MQ G+HPDDCSFVCV SAC
Sbjct: 297 ECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSAC 356
Query: 152 SNLSSPSQGKQLHSLALKSDIPMNRISVNNALVAMYSKCGNLQDARRLFE 3
SNLSSPS GKQ+H+LA+KSDIP NR+SVNNALVAMYSKCGN+ DARR+F+
Sbjct: 357 SNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFD 406
Score = 58.9 bits (141), Expect = 4e-07
Identities = 38/108 (35%), Positives = 61/108 (56%)
Frame = -2
Query: 329 AKKVFEEIPEPDLVLWNTMISGYSQNEKFSEDALDCFRRMQRVGYHPDDCSFVCVISACS 150
A++VF+EIP+PD+V +NT+I+ Y+ + AL F ++ + + D + VI AC
Sbjct: 94 ARQVFDEIPQPDIVSYNTLIAAYADRGE-CRPALRLFAEVRELRFGLDGFTLSGVIIACG 152
Query: 149 NLSSPSQGKQLHSLALKSDIPMNRISVNNALVAMYSKCGNLQDARRLF 6
+ +QLH + SVNNA++A YS+ G L +ARR+F
Sbjct: 153 D--DVGLVRQLHCFVVVCGYDC-YASVNNAVLACYSRKGFLNEARRVF 197