BLASTX nr result

ID: Cimicifuga21_contig00032520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032520
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA81866.1| unknown [Solanum tuberosum]                             88   8e-16
ref|XP_004157888.1| PREDICTED: mitochondrial import inner membra...    84   9e-15
ref|XP_004141020.1| PREDICTED: LOW QUALITY PROTEIN: mitochondria...    84   9e-15
emb|CBI27999.3| unnamed protein product [Vitis vinifera]               84   9e-15
ref|XP_002283637.1| PREDICTED: mitochondrial import inner membra...    84   9e-15

>gb|ABA81866.1| unknown [Solanum tuberosum]
          Length = 236

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 51/107 (47%), Positives = 61/107 (57%), Gaps = 12/107 (11%)
 Frame = +3

Query: 30  QFLKDVGGGFILGTVVSSALEFI------------CGGTQAVRKNTLRTGGTVAGACGVL 173
           + L DVGG F +G V  SA  F+             GGTQAVR N  R GG+ A   G+ 
Sbjct: 14  RILDDVGGAFGMGAVGGSAFHFLKGIYNSPKGERLIGGTQAVRMNAPRIGGSFAVWGGLF 73

Query: 174 SIVETTMGYFRQKEDKWNSIISGAAAFGVINIPKGLAIASRRAMLGG 314
           S  + TM Y RQKED WNSII+GAA  G + + +GL  ASR AM GG
Sbjct: 74  STFDCTMVYLRQKEDPWNSIIAGAATGGFLQMRQGLGAASRSAMFGG 120


>ref|XP_004157888.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim17-like [Cucumis sativus]
          Length = 237

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 49/107 (45%), Positives = 61/107 (57%), Gaps = 12/107 (11%)
 Frame = +3

Query: 30  QFLKDVGGGFILGTVVSSALEFI------------CGGTQAVRKNTLRTGGTVAGACGVL 173
           + L D+GG F +G V  SA  FI             GGTQAVR N  R GG+ A   G+ 
Sbjct: 14  RILDDIGGAFGMGAVGGSAFHFIKGLYNSPRGTRIIGGTQAVRMNAPRVGGSFAVWGGLF 73

Query: 174 SIVETTMGYFRQKEDKWNSIISGAAAFGVINIPKGLAIASRRAMLGG 314
           S  + TM Y RQKED WNSII+GAA  G + + +G A A+R A+ GG
Sbjct: 74  SAFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGPASAARSALFGG 120


>ref|XP_004141020.1| PREDICTED: LOW QUALITY PROTEIN: mitochondrial import inner membrane
           translocase subunit Tim17-like [Cucumis sativus]
          Length = 211

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 49/107 (45%), Positives = 61/107 (57%), Gaps = 12/107 (11%)
 Frame = +3

Query: 30  QFLKDVGGGFILGTVVSSALEFI------------CGGTQAVRKNTLRTGGTVAGACGVL 173
           + L D+GG F +G V  SA  FI             GGTQAVR N  R GG+ A   G+ 
Sbjct: 14  RILDDIGGAFGMGAVGGSAFHFIKGLYNSPRGTRIIGGTQAVRMNAPRVGGSFAVWGGLF 73

Query: 174 SIVETTMGYFRQKEDKWNSIISGAAAFGVINIPKGLAIASRRAMLGG 314
           S  + TM Y RQKED WNSII+GAA  G + + +G A A+R A+ GG
Sbjct: 74  SAFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGPASAARSALFGG 120


>emb|CBI27999.3| unnamed protein product [Vitis vinifera]
          Length = 205

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 48/107 (44%), Positives = 62/107 (57%), Gaps = 12/107 (11%)
 Frame = +3

Query: 30  QFLKDVGGGFILGTVVSSALEF------------ICGGTQAVRKNTLRTGGTVAGACGVL 173
           + L DVGG F +G V  SA  F            + GG+QAVR N  R GG+ A   G+ 
Sbjct: 14  RILDDVGGAFGMGAVGGSAFHFLKGIYNSPKGERVIGGSQAVRMNAPRVGGSFAVWGGLF 73

Query: 174 SIVETTMGYFRQKEDKWNSIISGAAAFGVINIPKGLAIASRRAMLGG 314
           S  + TM Y RQKED WNSII+GAA  G + + +GLA ++R A+ GG
Sbjct: 74  SAFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGLAASTRSAIFGG 120


>ref|XP_002283637.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim17-like [Vitis vinifera]
          Length = 226

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 48/107 (44%), Positives = 62/107 (57%), Gaps = 12/107 (11%)
 Frame = +3

Query: 30  QFLKDVGGGFILGTVVSSALEF------------ICGGTQAVRKNTLRTGGTVAGACGVL 173
           + L DVGG F +G V  SA  F            + GG+QAVR N  R GG+ A   G+ 
Sbjct: 14  RILDDVGGAFGMGAVGGSAFHFLKGIYNSPKGERVIGGSQAVRMNAPRVGGSFAVWGGLF 73

Query: 174 SIVETTMGYFRQKEDKWNSIISGAAAFGVINIPKGLAIASRRAMLGG 314
           S  + TM Y RQKED WNSII+GAA  G + + +GLA ++R A+ GG
Sbjct: 74  SAFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGLAASTRSAIFGG 120


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