BLASTX nr result

ID: Cimicifuga21_contig00032516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032516
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16200.3| unnamed protein product [Vitis vinifera]              167   1e-39
ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containi...   167   1e-39
emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]   166   1e-39
ref|XP_004157297.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   152   3e-35
ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containi...   152   3e-35

>emb|CBI16200.3| unnamed protein product [Vitis vinifera]
          Length = 1093

 Score =  167 bits (422), Expect = 1e-39
 Identities = 76/110 (69%), Positives = 95/110 (86%)
 Frame = +1

Query: 193 VRNPIPFISDLKEIGSPDDALRLFDEYQQMGYQHDYPSYSALIYKLARSTNFQAVETLLD 372
           +R  IPF++DLK +  PDDAL LF++YQQMG++HDYPSYSAL+YKLARS NF+AVETLLD
Sbjct: 449 LRKRIPFLADLKSVQDPDDALSLFNQYQQMGFKHDYPSYSALVYKLARSRNFEAVETLLD 508

Query: 373 YIKQKDIRCGETLFIAVIQHYGKSHLSDKAIDLFNRIPSFNCTRTLQSFN 522
           Y++  +IRC ETLFIA+IQHYGKS + +KA++LF R+PSFNC RTL SFN
Sbjct: 509 YLQNINIRCRETLFIALIQHYGKSQMPEKAVELFQRMPSFNCHRTLVSFN 558


>ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Vitis vinifera]
          Length = 501

 Score =  167 bits (422), Expect = 1e-39
 Identities = 76/110 (69%), Positives = 95/110 (86%)
 Frame = +1

Query: 193 VRNPIPFISDLKEIGSPDDALRLFDEYQQMGYQHDYPSYSALIYKLARSTNFQAVETLLD 372
           +R  IPF++DLK +  PDDAL LF++YQQMG++HDYPSYSAL+YKLARS NF+AVETLLD
Sbjct: 87  LRKRIPFLADLKSVQDPDDALSLFNQYQQMGFKHDYPSYSALVYKLARSRNFEAVETLLD 146

Query: 373 YIKQKDIRCGETLFIAVIQHYGKSHLSDKAIDLFNRIPSFNCTRTLQSFN 522
           Y++  +IRC ETLFIA+IQHYGKS + +KA++LF R+PSFNC RTL SFN
Sbjct: 147 YLQNINIRCRETLFIALIQHYGKSQMPEKAVELFQRMPSFNCHRTLVSFN 196


>emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
          Length = 1051

 Score =  166 bits (421), Expect = 1e-39
 Identities = 76/110 (69%), Positives = 95/110 (86%)
 Frame = +1

Query: 193 VRNPIPFISDLKEIGSPDDALRLFDEYQQMGYQHDYPSYSALIYKLARSTNFQAVETLLD 372
           +R  IPF++DLK +  PDDAL LF++YQQMG++HDYPSYSAL+YKLARS NF+AVETLLD
Sbjct: 378 LRKRIPFLADLKSVQDPDDALSLFNQYQQMGFKHDYPSYSALVYKLARSRNFEAVETLLD 437

Query: 373 YIKQKDIRCGETLFIAVIQHYGKSHLSDKAIDLFNRIPSFNCTRTLQSFN 522
           Y++  +IRC ETLFIA+IQHYGKS + +KAI+LF R+PSFNC RT+ SFN
Sbjct: 438 YLQNINIRCRETLFIALIQHYGKSQMPEKAIELFQRMPSFNCHRTIVSFN 487


>ref|XP_004157297.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g07740, mitochondrial-like [Cucumis sativus]
          Length = 460

 Score =  152 bits (384), Expect = 3e-35
 Identities = 66/110 (60%), Positives = 92/110 (83%)
 Frame = +1

Query: 193 VRNPIPFISDLKEIGSPDDALRLFDEYQQMGYQHDYPSYSALIYKLARSTNFQAVETLLD 372
           +R  IPF++D+KE+  P +AL LF+ Y + G++H YPSYS+LIYKLARS  F+AVET+L 
Sbjct: 46  IRERIPFVTDVKEVKDPCEALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILG 105

Query: 373 YIKQKDIRCGETLFIAVIQHYGKSHLSDKAIDLFNRIPSFNCTRTLQSFN 522
           +++ ++IRC ETLF+A+IQHYGK+HL +K I+LF+++PSFNC RTLQSFN
Sbjct: 106 HLRNRNIRCNETLFVALIQHYGKAHLVEKGIELFHQMPSFNCFRTLQSFN 155


>ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Cucumis sativus]
          Length = 460

 Score =  152 bits (384), Expect = 3e-35
 Identities = 66/110 (60%), Positives = 92/110 (83%)
 Frame = +1

Query: 193 VRNPIPFISDLKEIGSPDDALRLFDEYQQMGYQHDYPSYSALIYKLARSTNFQAVETLLD 372
           +R  IPF++D+KE+  P +AL LF+ Y + G++H YPSYS+LIYKLARS  F+AVET+L 
Sbjct: 46  IRERIPFVTDVKEVKDPCEALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILG 105

Query: 373 YIKQKDIRCGETLFIAVIQHYGKSHLSDKAIDLFNRIPSFNCTRTLQSFN 522
           +++ ++IRC ETLF+A+IQHYGK+HL +K I+LF+++PSFNC RTLQSFN
Sbjct: 106 HLRNRNIRCNETLFVALIQHYGKAHLVEKGIELFHQMPSFNCFRTLQSFN 155


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