BLASTX nr result

ID: Cimicifuga21_contig00032513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032513
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278083.1| PREDICTED: probable spermidine synthase-like...   249   2e-64
ref|XP_002322191.1| predicted protein [Populus trichocarpa] gi|2...   245   3e-63
ref|XP_004152566.1| PREDICTED: uncharacterized protein LOC101205...   228   7e-58
ref|XP_004172274.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   227   1e-57
ref|XP_002866534.1| hypothetical protein ARALYDRAFT_496492 [Arab...   220   1e-55

>ref|XP_002278083.1| PREDICTED: probable spermidine synthase-like [Vitis vinifera]
          Length = 334

 Score =  249 bits (636), Expect = 2e-64
 Identities = 128/188 (68%), Positives = 144/188 (76%)
 Frame = -2

Query: 564 PGNIHSISFLFKQLTNTYFDVFATXXXXXXXXXXXXXXXGAGSAAHFILDLHPQVSIHGW 385
           PGNIHSISFL K  T+TYFDV AT               GAGSAA  IL+ +PQV +HGW
Sbjct: 113 PGNIHSISFLLKSFTDTYFDVLATLPAILPPGPLGILGFGAGSAARLILETYPQVVVHGW 172

Query: 384 ELDPSVISVGREYFDLLKLEKENPNRLFIHIGDALEASVRDGFSGILVDLFCNGSLIPEL 205
           ELDPSVI VGREYF L KLEKE+P+RLFI+IG+AL ASVR+GFSGILVDLFC GSLIPEL
Sbjct: 173 ELDPSVIEVGREYFGLSKLEKEHPHRLFIYIGNALNASVRNGFSGILVDLFCKGSLIPEL 232

Query: 204 QDKKTWEXXXXXXXXXXRIIVNVGGSCVESEDMQRDGKLVMDETLKAMHCVFADQLFVLN 25
           QD  TWE          RI+VNVGGSCVE+ED +RDGK+VM+E+LKAMH VF DQ+FVLN
Sbjct: 233 QDPGTWEKLRKRLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEESLKAMHKVFGDQVFVLN 292

Query: 24  LGNRNEDS 1
           LGNR EDS
Sbjct: 293 LGNRKEDS 300


>ref|XP_002322191.1| predicted protein [Populus trichocarpa] gi|222869187|gb|EEF06318.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score =  245 bits (626), Expect = 3e-63
 Identities = 124/188 (65%), Positives = 143/188 (76%)
 Frame = -2

Query: 564 PGNIHSISFLFKQLTNTYFDVFATXXXXXXXXXXXXXXXGAGSAAHFILDLHPQVSIHGW 385
           PGNIHSISFLFK LTNTYFDVFA                GAGSAA  +L+L+P V +HGW
Sbjct: 51  PGNIHSISFLFKSLTNTYFDVFAALPPIIPPGPIAILGFGAGSAARLLLELYPGVVVHGW 110

Query: 384 ELDPSVISVGREYFDLLKLEKENPNRLFIHIGDALEASVRDGFSGILVDLFCNGSLIPEL 205
           ELD SVI VGRE+F L KLEK+ P+RLFI++G+AL A V+DGFSGILVDLFC GSLIPEL
Sbjct: 111 ELDSSVIDVGREFFGLKKLEKQYPDRLFIYVGNALSAKVKDGFSGILVDLFCKGSLIPEL 170

Query: 204 QDKKTWEXXXXXXXXXXRIIVNVGGSCVESEDMQRDGKLVMDETLKAMHCVFADQLFVLN 25
           QD  TWE          RI+VNVGGSCVE+ED +RDGK+VM++TLKAMH VF D+LFVLN
Sbjct: 171 QDPNTWEKLRKSLRKGGRIMVNVGGSCVEAEDKRRDGKVVMEDTLKAMHQVFGDRLFVLN 230

Query: 24  LGNRNEDS 1
           LGNR +DS
Sbjct: 231 LGNRKDDS 238


>ref|XP_004152566.1| PREDICTED: uncharacterized protein LOC101205232 [Cucumis sativus]
          Length = 331

 Score =  228 bits (580), Expect = 7e-58
 Identities = 115/188 (61%), Positives = 141/188 (75%)
 Frame = -2

Query: 564 PGNIHSISFLFKQLTNTYFDVFATXXXXXXXXXXXXXXXGAGSAAHFILDLHPQVSIHGW 385
           PGNIHSISFLFK LTNTYFDVFAT               GAGSAA  IL L+P+V +HGW
Sbjct: 109 PGNIHSISFLFKSLTNTYFDVFATLPPILPSGPIGILGFGAGSAARSILKLYPEVVVHGW 168

Query: 384 ELDPSVISVGREYFDLLKLEKENPNRLFIHIGDALEASVRDGFSGILVDLFCNGSLIPEL 205
           ELDPSV++VGRE+F + KLEK+ P+RLFI+IG+AL A+V  GF+GILVDLF  GSLIPEL
Sbjct: 169 ELDPSVVAVGREFFGVSKLEKKYPDRLFIYIGNALNANVTGGFAGILVDLFSEGSLIPEL 228

Query: 204 QDKKTWEXXXXXXXXXXRIIVNVGGSCVESEDMQRDGKLVMDETLKAMHCVFADQLFVLN 25
           +D  TW           R++VNVGGSCVE+ED++RDGK+VM++TLKAMH V+  +L+VL 
Sbjct: 229 EDPNTWRMLERCLMKGGRVMVNVGGSCVEAEDIRRDGKVVMEQTLKAMHQVYGKKLWVLR 288

Query: 24  LGNRNEDS 1
           LGN  +DS
Sbjct: 289 LGNGEDDS 296


>ref|XP_004172274.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101205232,
           partial [Cucumis sativus]
          Length = 323

 Score =  227 bits (578), Expect = 1e-57
 Identities = 115/188 (61%), Positives = 140/188 (74%)
 Frame = -2

Query: 564 PGNIHSISFLFKQLTNTYFDVFATXXXXXXXXXXXXXXXGAGSAAHFILDLHPQVSIHGW 385
           PGNIHSISFLFK LTNTYFDVFAT               GAGSAA  IL L+P+V +HGW
Sbjct: 109 PGNIHSISFLFKSLTNTYFDVFATLPPILPSGPIGILGFGAGSAARSILKLYPEVVVHGW 168

Query: 384 ELDPSVISVGREYFDLLKLEKENPNRLFIHIGDALEASVRDGFSGILVDLFCNGSLIPEL 205
           ELDPSV++VGRE+F + KLEK  P+RLFI+IG+AL A+V  GF+GILVDLF  GSLIPEL
Sbjct: 169 ELDPSVVAVGREFFGVSKLEKXYPDRLFIYIGNALNANVTGGFAGILVDLFSEGSLIPEL 228

Query: 204 QDKKTWEXXXXXXXXXXRIIVNVGGSCVESEDMQRDGKLVMDETLKAMHCVFADQLFVLN 25
           +D  TW           R++VNVGGSCVE+ED++RDGK+VM++TLKAMH V+  +L+VL 
Sbjct: 229 EDPNTWRMLERCLMKGGRVMVNVGGSCVEAEDIRRDGKVVMEQTLKAMHQVYGKKLWVLR 288

Query: 24  LGNRNEDS 1
           LGN  +DS
Sbjct: 289 LGNGEDDS 296


>ref|XP_002866534.1| hypothetical protein ARALYDRAFT_496492 [Arabidopsis lyrata subsp.
           lyrata] gi|297312369|gb|EFH42793.1| hypothetical protein
           ARALYDRAFT_496492 [Arabidopsis lyrata subsp. lyrata]
          Length = 329

 Score =  220 bits (560), Expect = 1e-55
 Identities = 115/189 (60%), Positives = 140/189 (74%), Gaps = 1/189 (0%)
 Frame = -2

Query: 564 PGNIHSISFLFKQLTNTYFDVFATXXXXXXXXXXXXXXXGAGSAAHFILDLHP-QVSIHG 388
           PGNIHSISFL K LT++YFDVFAT               GAGS A  IL+L+P +++IHG
Sbjct: 102 PGNIHSISFLLKTLTDSYFDVFATLPPIIPPGPIGILGFGAGSTARLILELYPPEIAIHG 161

Query: 387 WELDPSVISVGREYFDLLKLEKENPNRLFIHIGDALEASVRDGFSGILVDLFCNGSLIPE 208
           WELDPSVI VGRE+F L KLE+++ +R+FI+IGDAL+ASV+ GFSGILVDLF  GS+I E
Sbjct: 162 WELDPSVIDVGREFFGLSKLERDHKDRIFINIGDALKASVKTGFSGILVDLFSKGSVIKE 221

Query: 207 LQDKKTWEXXXXXXXXXXRIIVNVGGSCVESEDMQRDGKLVMDETLKAMHCVFADQLFVL 28
           LQD + WE          RI+VNVGG CVE+ED +RDG LVM+ETLKAM+ VF D+LFVL
Sbjct: 222 LQDPQVWEDLKCRLRNRGRIMVNVGGKCVEAEDSERDGGLVMEETLKAMNQVFGDKLFVL 281

Query: 27  NLGNRNEDS 1
            LGN N+ S
Sbjct: 282 TLGNGNDSS 290


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