BLASTX nr result
ID: Cimicifuga21_contig00032508
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00032508 (236 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su... 112 4e-23 emb|CBI21412.3| unnamed protein product [Vitis vinifera] 112 4e-23 ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic su... 99 4e-19 ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic su... 99 4e-19 ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, puta... 97 1e-18 >ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis vinifera] Length = 1522 Score = 112 bits (279), Expect = 4e-23 Identities = 53/78 (67%), Positives = 66/78 (84%) Frame = +3 Query: 3 PNTSVFHNDVIMELERDVADSRISTAIFRTRLQEMASGLKNEITRKLLDLNVSTFSMAPV 182 PN SVF ND IM LE+D+ SR+S A RT+LQ++ASGLKNEI ++LL+LNVSTFSM PV Sbjct: 389 PNDSVFGNDEIMRLEKDIEASRVSPAALRTKLQDVASGLKNEIAKQLLNLNVSTFSMTPV 448 Query: 183 KRGYAFERSDIPIGQHYV 236 KR YAFER+DIP+G++YV Sbjct: 449 KRSYAFERADIPVGENYV 466 >emb|CBI21412.3| unnamed protein product [Vitis vinifera] Length = 1561 Score = 112 bits (279), Expect = 4e-23 Identities = 53/78 (67%), Positives = 66/78 (84%) Frame = +3 Query: 3 PNTSVFHNDVIMELERDVADSRISTAIFRTRLQEMASGLKNEITRKLLDLNVSTFSMAPV 182 PN SVF ND IM LE+D+ SR+S A RT+LQ++ASGLKNEI ++LL+LNVSTFSM PV Sbjct: 390 PNDSVFGNDEIMRLEKDIEASRVSPAALRTKLQDVASGLKNEIAKQLLNLNVSTFSMTPV 449 Query: 183 KRGYAFERSDIPIGQHYV 236 KR YAFER+DIP+G++YV Sbjct: 450 KRSYAFERADIPVGENYV 467 >ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic subunit-like, partial [Cucumis sativus] Length = 498 Score = 99.0 bits (245), Expect = 4e-19 Identities = 45/78 (57%), Positives = 62/78 (79%) Frame = +3 Query: 3 PNTSVFHNDVIMELERDVADSRISTAIFRTRLQEMASGLKNEITRKLLDLNVSTFSMAPV 182 P+ S H+D ++EL++D +S++S A R +LQE+ +GLKNE+ ++LLDLNVSTFSM PV Sbjct: 413 PSASFLHSDEMLELQKDAEESQLSPADLRAKLQEVTAGLKNEMAKQLLDLNVSTFSMTPV 472 Query: 183 KRGYAFERSDIPIGQHYV 236 KR YAFER DIP G++YV Sbjct: 473 KRKYAFERQDIPAGENYV 490 >ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Cucumis sativus] Length = 1547 Score = 99.0 bits (245), Expect = 4e-19 Identities = 45/78 (57%), Positives = 62/78 (79%) Frame = +3 Query: 3 PNTSVFHNDVIMELERDVADSRISTAIFRTRLQEMASGLKNEITRKLLDLNVSTFSMAPV 182 P+ S H+D ++EL++D +S++S A R +LQE+ +GLKNE+ ++LLDLNVSTFSM PV Sbjct: 413 PSASFLHSDEMLELQKDAEESQLSPADLRAKLQEVTAGLKNEMAKQLLDLNVSTFSMTPV 472 Query: 183 KRGYAFERSDIPIGQHYV 236 KR YAFER DIP G++YV Sbjct: 473 KRKYAFERQDIPAGENYV 490 >ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis] gi|223537171|gb|EEF38804.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis] Length = 1526 Score = 97.4 bits (241), Expect = 1e-18 Identities = 46/77 (59%), Positives = 60/77 (77%) Frame = +3 Query: 3 PNTSVFHNDVIMELERDVADSRISTAIFRTRLQEMASGLKNEITRKLLDLNVSTFSMAPV 182 PN S+FH + ++ LE+DV +SRIS A FR +LQ++A LKNEI + L LNVS+FSM PV Sbjct: 388 PNGSIFHTEDMIRLEKDVEESRISPAEFRKKLQDVAYELKNEIANQFLSLNVSSFSMTPV 447 Query: 183 KRGYAFERSDIPIGQHY 233 KR YAFER DIP+G++Y Sbjct: 448 KRKYAFERQDIPVGENY 464