BLASTX nr result

ID: Cimicifuga21_contig00032508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032508
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...   112   4e-23
emb|CBI21412.3| unnamed protein product [Vitis vinifera]              112   4e-23
ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic su...    99   4e-19
ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic su...    99   4e-19
ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, puta...    97   1e-18

>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
           vinifera]
          Length = 1522

 Score =  112 bits (279), Expect = 4e-23
 Identities = 53/78 (67%), Positives = 66/78 (84%)
 Frame = +3

Query: 3   PNTSVFHNDVIMELERDVADSRISTAIFRTRLQEMASGLKNEITRKLLDLNVSTFSMAPV 182
           PN SVF ND IM LE+D+  SR+S A  RT+LQ++ASGLKNEI ++LL+LNVSTFSM PV
Sbjct: 389 PNDSVFGNDEIMRLEKDIEASRVSPAALRTKLQDVASGLKNEIAKQLLNLNVSTFSMTPV 448

Query: 183 KRGYAFERSDIPIGQHYV 236
           KR YAFER+DIP+G++YV
Sbjct: 449 KRSYAFERADIPVGENYV 466


>emb|CBI21412.3| unnamed protein product [Vitis vinifera]
          Length = 1561

 Score =  112 bits (279), Expect = 4e-23
 Identities = 53/78 (67%), Positives = 66/78 (84%)
 Frame = +3

Query: 3   PNTSVFHNDVIMELERDVADSRISTAIFRTRLQEMASGLKNEITRKLLDLNVSTFSMAPV 182
           PN SVF ND IM LE+D+  SR+S A  RT+LQ++ASGLKNEI ++LL+LNVSTFSM PV
Sbjct: 390 PNDSVFGNDEIMRLEKDIEASRVSPAALRTKLQDVASGLKNEIAKQLLNLNVSTFSMTPV 449

Query: 183 KRGYAFERSDIPIGQHYV 236
           KR YAFER+DIP+G++YV
Sbjct: 450 KRSYAFERADIPVGENYV 467


>ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic subunit-like, partial
           [Cucumis sativus]
          Length = 498

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 45/78 (57%), Positives = 62/78 (79%)
 Frame = +3

Query: 3   PNTSVFHNDVIMELERDVADSRISTAIFRTRLQEMASGLKNEITRKLLDLNVSTFSMAPV 182
           P+ S  H+D ++EL++D  +S++S A  R +LQE+ +GLKNE+ ++LLDLNVSTFSM PV
Sbjct: 413 PSASFLHSDEMLELQKDAEESQLSPADLRAKLQEVTAGLKNEMAKQLLDLNVSTFSMTPV 472

Query: 183 KRGYAFERSDIPIGQHYV 236
           KR YAFER DIP G++YV
Sbjct: 473 KRKYAFERQDIPAGENYV 490


>ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Cucumis
           sativus]
          Length = 1547

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 45/78 (57%), Positives = 62/78 (79%)
 Frame = +3

Query: 3   PNTSVFHNDVIMELERDVADSRISTAIFRTRLQEMASGLKNEITRKLLDLNVSTFSMAPV 182
           P+ S  H+D ++EL++D  +S++S A  R +LQE+ +GLKNE+ ++LLDLNVSTFSM PV
Sbjct: 413 PSASFLHSDEMLELQKDAEESQLSPADLRAKLQEVTAGLKNEMAKQLLDLNVSTFSMTPV 472

Query: 183 KRGYAFERSDIPIGQHYV 236
           KR YAFER DIP G++YV
Sbjct: 473 KRKYAFERQDIPAGENYV 490


>ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis]
           gi|223537171|gb|EEF38804.1| DNA polymerase alpha
           catalytic subunit, putative [Ricinus communis]
          Length = 1526

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 46/77 (59%), Positives = 60/77 (77%)
 Frame = +3

Query: 3   PNTSVFHNDVIMELERDVADSRISTAIFRTRLQEMASGLKNEITRKLLDLNVSTFSMAPV 182
           PN S+FH + ++ LE+DV +SRIS A FR +LQ++A  LKNEI  + L LNVS+FSM PV
Sbjct: 388 PNGSIFHTEDMIRLEKDVEESRISPAEFRKKLQDVAYELKNEIANQFLSLNVSSFSMTPV 447

Query: 183 KRGYAFERSDIPIGQHY 233
           KR YAFER DIP+G++Y
Sbjct: 448 KRKYAFERQDIPVGENY 464


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