BLASTX nr result

ID: Cimicifuga21_contig00032506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032506
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523545.1| conserved hypothetical protein [Ricinus comm...    96   4e-18
ref|XP_002324568.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18
ref|XP_002309319.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
emb|CAN80242.1| hypothetical protein VITISV_029130 [Vitis vinifera]    83   2e-14
gb|AFK34000.1| unknown [Lotus japonicus]                               81   1e-13

>ref|XP_002523545.1| conserved hypothetical protein [Ricinus communis]
           gi|223537252|gb|EEF38884.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 131

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 44/68 (64%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
 Frame = -3

Query: 394 MATGSADGMIRCVFDGCLSVSDVDIERRPYHRNCGCALH-KSKGTCCKPSNRNKKISYPM 218
           MATGSADG  R V+DGCLS  D+ IERRPYHRNC CALH KSK  C    ++ K +SYP+
Sbjct: 1   MATGSADGFFRYVYDGCLSGGDMGIERRPYHRNCRCALHNKSKDNCPHGMSKCKNVSYPI 60

Query: 217 RRSWSESC 194
           RR+WSE C
Sbjct: 61  RRAWSEGC 68


>ref|XP_002324568.1| predicted protein [Populus trichocarpa] gi|222866002|gb|EEF03133.1|
           predicted protein [Populus trichocarpa]
          Length = 115

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 43/65 (66%), Positives = 49/65 (75%)
 Frame = -3

Query: 394 MATGSADGMIRCVFDGCLSVSDVDIERRPYHRNCGCALHKSKGTCCKPSNRNKKISYPMR 215
           MATGSADG  R V+DGCLS  D+ I+RRPYHRNC CALHKSK  C     R K +SYP++
Sbjct: 1   MATGSADGFFRHVYDGCLSSGDMGIDRRPYHRNCRCALHKSKENCPHALPRCKNVSYPIK 60

Query: 214 RSWSE 200
           RSWSE
Sbjct: 61  RSWSE 65


>ref|XP_002309319.1| predicted protein [Populus trichocarpa] gi|222855295|gb|EEE92842.1|
           predicted protein [Populus trichocarpa]
          Length = 118

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 39/65 (60%), Positives = 47/65 (72%)
 Frame = -3

Query: 394 MATGSADGMIRCVFDGCLSVSDVDIERRPYHRNCGCALHKSKGTCCKPSNRNKKISYPMR 215
           MA G+ADG  R V DGCLS  ++ I+RRPYHRNC CALHKSK  C    +R K +SYP++
Sbjct: 1   MAAGAADGFFRYVHDGCLSGGEMGIDRRPYHRNCSCALHKSKENCSHAMSRYKNVSYPIK 60

Query: 214 RSWSE 200
           R WSE
Sbjct: 61  RCWSE 65


>emb|CAN80242.1| hypothetical protein VITISV_029130 [Vitis vinifera]
          Length = 113

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/67 (56%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
 Frame = -3

Query: 394 MATGSADGMIRCVFDGCLSVSDVDIERRPYHRNCGCALHKSKGTCCK--PSNRNKKISYP 221
           MATG+A+G++  V++GC+S  D+ IERRPYHRNC CALHKSKG      P+  ++ +SY 
Sbjct: 1   MATGAAEGLLWGVYEGCISGCDMGIERRPYHRNCKCALHKSKGNTGSRAPAKGSQSLSYR 60

Query: 220 MRRSWSE 200
           +RRSWSE
Sbjct: 61  IRRSWSE 67


>gb|AFK34000.1| unknown [Lotus japonicus]
          Length = 120

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 33/61 (54%), Positives = 44/61 (72%)
 Frame = -3

Query: 382 SADGMIRCVFDGCLSVSDVDIERRPYHRNCGCALHKSKGTCCKPSNRNKKISYPMRRSWS 203
           +ADG+ R +++GC+S  D  +ERRPYHRNCGCALH +  +C     R   +SYPMRR+WS
Sbjct: 4   AADGLFRPIYEGCISGHDHGVERRPYHRNCGCALHSNNKSCRHGMPRCNNVSYPMRRAWS 63

Query: 202 E 200
           E
Sbjct: 64  E 64


Top