BLASTX nr result

ID: Cimicifuga21_contig00032499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032499
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23882.3| unnamed protein product [Vitis vinifera]              105   3e-21
ref|XP_002273942.1| PREDICTED: kinetochore protein NDC80 homolog...   105   3e-21
emb|CAN64748.1| hypothetical protein VITISV_041326 [Vitis vinifera]   105   3e-21
emb|CAN66776.1| hypothetical protein VITISV_035303 [Vitis vinifera]   105   3e-21
emb|CBI38595.3| unnamed protein product [Vitis vinifera]              104   6e-21

>emb|CBI23882.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  105 bits (263), Expect = 3e-21
 Identities = 63/124 (50%), Positives = 83/124 (66%), Gaps = 3/124 (2%)
 Frame = +3

Query: 3   RPKAEPTIPDRTPLIHDTPRQFSVTSNRDSDASYGTNRQS---YNSSLARAVPINDKAYK 173
           RPK     P       D  RQFS    RDSDAS+ ++R S    N S A    + D++Y+
Sbjct: 8   RPKDSIRPPPPPAPSVDHHRQFS----RDSDASFASSRPSSLGINRSSAGDA-LTDRSYQ 62

Query: 174 DSAFRTINNYLSSHSLHFFLRPPLPSAKDITDTIRFLFSRLDWPTENIKLEEDLPLLMKH 353
            SA RTIN++L+SHS    L+PPLPSAKDI++T++FL S+LD+PT   KLE+DLP+L+KH
Sbjct: 63  LSAIRTINSFLASHSSPLSLKPPLPSAKDISETLKFLISQLDFPT--TKLEDDLPILLKH 120

Query: 354 LNCP 365
           LNCP
Sbjct: 121 LNCP 124


>ref|XP_002273942.1| PREDICTED: kinetochore protein NDC80 homolog [Vitis vinifera]
          Length = 571

 Score =  105 bits (263), Expect = 3e-21
 Identities = 63/124 (50%), Positives = 83/124 (66%), Gaps = 3/124 (2%)
 Frame = +3

Query: 3   RPKAEPTIPDRTPLIHDTPRQFSVTSNRDSDASYGTNRQS---YNSSLARAVPINDKAYK 173
           RPK     P       D  RQFS    RDSDAS+ ++R S    N S A    + D++Y+
Sbjct: 8   RPKDSIRPPPPPAPSVDHHRQFS----RDSDASFASSRPSSLGINRSSAGDA-LTDRSYQ 62

Query: 174 DSAFRTINNYLSSHSLHFFLRPPLPSAKDITDTIRFLFSRLDWPTENIKLEEDLPLLMKH 353
            SA RTIN++L+SHS    L+PPLPSAKDI++T++FL S+LD+PT   KLE+DLP+L+KH
Sbjct: 63  LSAIRTINSFLASHSSPLSLKPPLPSAKDISETLKFLISQLDFPT--TKLEDDLPILLKH 120

Query: 354 LNCP 365
           LNCP
Sbjct: 121 LNCP 124


>emb|CAN64748.1| hypothetical protein VITISV_041326 [Vitis vinifera]
          Length = 1261

 Score =  105 bits (263), Expect = 3e-21
 Identities = 63/124 (50%), Positives = 83/124 (66%), Gaps = 3/124 (2%)
 Frame = +3

Query: 3   RPKAEPTIPDRTPLIHDTPRQFSVTSNRDSDASYGTNRQS---YNSSLARAVPINDKAYK 173
           RPK     P   P   D  RQFS    R+SDAS+ ++R S    N S A    + D++Y+
Sbjct: 8   RPKDSIRPPPPPPPSVDHHRQFS----RNSDASFASSRPSSLGINRSSAGDA-LTDRSYQ 62

Query: 174 DSAFRTINNYLSSHSLHFFLRPPLPSAKDITDTIRFLFSRLDWPTENIKLEEDLPLLMKH 353
            SA RTIN++L+SHS    L+PPLPSAKDI++T++FL S LD+PT   KLE+DLP+L+KH
Sbjct: 63  LSAIRTINSFLASHSSPLPLKPPLPSAKDISETLKFLISELDFPT--TKLEDDLPILLKH 120

Query: 354 LNCP 365
           LNCP
Sbjct: 121 LNCP 124


>emb|CAN66776.1| hypothetical protein VITISV_035303 [Vitis vinifera]
          Length = 735

 Score =  105 bits (263), Expect = 3e-21
 Identities = 63/124 (50%), Positives = 83/124 (66%), Gaps = 3/124 (2%)
 Frame = +3

Query: 3   RPKAEPTIPDRTPLIHDTPRQFSVTSNRDSDASYGTNRQS---YNSSLARAVPINDKAYK 173
           RPK     P       D  RQFS    RDSDAS+ ++R S    N S A    + D++Y+
Sbjct: 8   RPKDSIRPPPPPAPSVDHHRQFS----RDSDASFASSRPSSLGINRSSAGDA-LTDRSYQ 62

Query: 174 DSAFRTINNYLSSHSLHFFLRPPLPSAKDITDTIRFLFSRLDWPTENIKLEEDLPLLMKH 353
            SA RTIN++L+SHS    L+PPLPSAKDI++T++FL S+LD+PT   KLE+DLP+L+KH
Sbjct: 63  LSAIRTINSFLASHSSPLSLKPPLPSAKDISETLKFLISQLDFPT--TKLEDDLPILLKH 120

Query: 354 LNCP 365
           LNCP
Sbjct: 121 LNCP 124


>emb|CBI38595.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  104 bits (260), Expect = 6e-21
 Identities = 61/123 (49%), Positives = 81/123 (65%), Gaps = 2/123 (1%)
 Frame = +3

Query: 3   RPKAEPTIPDRTPLIHDTPRQFSVTSNRDSDASYGTNRQSYN--SSLARAVPINDKAYKD 176
           RPK     P   P   D  RQ S    RDSDAS+  +R S    S  +    + D++Y+ 
Sbjct: 222 RPKDSFRPPPPPPPSVDHHRQLS----RDSDASFAGSRPSSLGISRSSAGDALTDRSYQL 277

Query: 177 SAFRTINNYLSSHSLHFFLRPPLPSAKDITDTIRFLFSRLDWPTENIKLEEDLPLLMKHL 356
           SA RTIN++L+SHS    L+PPLPSAKDI++T++FL S+LD+PT   KLE+DLP+L+KHL
Sbjct: 278 SAIRTINSFLASHSSPLSLKPPLPSAKDISETLKFLISQLDFPT--TKLEDDLPILLKHL 335

Query: 357 NCP 365
           NCP
Sbjct: 336 NCP 338


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