BLASTX nr result

ID: Cimicifuga21_contig00032492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032492
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511315.1| thyroid hormone receptor interactor, putativ...   170   1e-40
ref|XP_002318075.1| predicted protein [Populus trichocarpa] gi|1...   170   1e-40
ref|XP_002322204.1| predicted protein [Populus trichocarpa] gi|2...   168   5e-40
ref|XP_003601182.1| Thyroid receptor-interacting protein [Medica...   167   1e-39
ref|XP_003526996.1| PREDICTED: pachytene checkpoint protein 2 ho...   166   2e-39

>ref|XP_002511315.1| thyroid hormone receptor interactor, putative [Ricinus communis]
           gi|223550430|gb|EEF51917.1| thyroid hormone receptor
           interactor, putative [Ricinus communis]
          Length = 460

 Score =  170 bits (430), Expect = 1e-40
 Identities = 88/121 (72%), Positives = 104/121 (85%), Gaps = 4/121 (3%)
 Frame = +3

Query: 3   QMDKLKSSPNAIILTTSNITAAIDVAFVDRADIKAYVGPPTVQARYEILRSCVQELIRTG 182
           QMDKLK SPN IILTTSNITAAID+AFVDRADIKAYVGPPT+QARYEILRSC+QELIRTG
Sbjct: 306 QMDKLKCSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELIRTG 365

Query: 183 ILTE----DHIFLPSYNSLRERLNVSDAHDSNTPPLHLAKQLLEAAEVCEGLSGRTLRKL 350
           I++     D++ LP+Y +L+E++N S A ++ T P+ L KQLLEAAE CEGLSGR+LRKL
Sbjct: 366 IISNFQDPDNLVLPNYPTLKEKMNGSAAQEAQT-PVKLGKQLLEAAEACEGLSGRSLRKL 424

Query: 351 P 353
           P
Sbjct: 425 P 425


>ref|XP_002318075.1| predicted protein [Populus trichocarpa] gi|118485393|gb|ABK94553.1|
           unknown [Populus trichocarpa]
           gi|222858748|gb|EEE96295.1| predicted protein [Populus
           trichocarpa]
          Length = 465

 Score =  170 bits (430), Expect = 1e-40
 Identities = 86/121 (71%), Positives = 103/121 (85%), Gaps = 4/121 (3%)
 Frame = +3

Query: 3   QMDKLKSSPNAIILTTSNITAAIDVAFVDRADIKAYVGPPTVQARYEILRSCVQELIRTG 182
           QMDKLK+SPN IILTTSNITAAID+AFVDRADIKAYVGPPT+QARYEILRSC+QEL+RTG
Sbjct: 310 QMDKLKTSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELLRTG 369

Query: 183 ILT----EDHIFLPSYNSLRERLNVSDAHDSNTPPLHLAKQLLEAAEVCEGLSGRTLRKL 350
           I++     D++ LP+Y++LRE+LN  D  ++  P L   KQLLEAAE CEG+SGR+LRKL
Sbjct: 370 IISNFQDSDYLMLPNYSTLREKLNAPDIQEAQ-PVLPFCKQLLEAAEACEGMSGRSLRKL 428

Query: 351 P 353
           P
Sbjct: 429 P 429


>ref|XP_002322204.1| predicted protein [Populus trichocarpa] gi|222869200|gb|EEF06331.1|
           predicted protein [Populus trichocarpa]
          Length = 410

 Score =  168 bits (425), Expect = 5e-40
 Identities = 87/121 (71%), Positives = 101/121 (83%), Gaps = 4/121 (3%)
 Frame = +3

Query: 3   QMDKLKSSPNAIILTTSNITAAIDVAFVDRADIKAYVGPPTVQARYEILRSCVQELIRTG 182
           QMDKLK+SPN IILTTSNITAAID+AFVDRADIKAYVGPPT+QARYEILRSC+QEL+RTG
Sbjct: 261 QMDKLKASPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELLRTG 320

Query: 183 ILT----EDHIFLPSYNSLRERLNVSDAHDSNTPPLHLAKQLLEAAEVCEGLSGRTLRKL 350
           I++     DH+ LP Y++LRE+LN   A     P L+  KQLLEAAE CEG+SGR+LRKL
Sbjct: 321 IVSNFQGSDHLVLPDYSTLREKLN---APTEAQPVLNFCKQLLEAAEACEGMSGRSLRKL 377

Query: 351 P 353
           P
Sbjct: 378 P 378


>ref|XP_003601182.1| Thyroid receptor-interacting protein [Medicago truncatula]
           gi|355490230|gb|AES71433.1| Thyroid receptor-interacting
           protein [Medicago truncatula]
          Length = 461

 Score =  167 bits (422), Expect = 1e-39
 Identities = 88/121 (72%), Positives = 103/121 (85%), Gaps = 4/121 (3%)
 Frame = +3

Query: 3   QMDKLKSSPNAIILTTSNITAAIDVAFVDRADIKAYVGPPTVQARYEILRSCVQELIRTG 182
           QMDKLKSSPN IILTTSNITAAID+AFVDRADIKAYVGPPT+QARYEILRSCVQEL+RTG
Sbjct: 307 QMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCVQELMRTG 366

Query: 183 ILT--ED--HIFLPSYNSLRERLNVSDAHDSNTPPLHLAKQLLEAAEVCEGLSGRTLRKL 350
           ILT  ED  +I LP+Y S ++R+N  D H++ T  + L K+L+E AE CEG+SGR+LRKL
Sbjct: 367 ILTNFEDCKNIMLPNYASAKQRMNAPDFHEATT-FMQLCKKLVETAEACEGMSGRSLRKL 425

Query: 351 P 353
           P
Sbjct: 426 P 426


>ref|XP_003526996.1| PREDICTED: pachytene checkpoint protein 2 homolog [Glycine max]
          Length = 448

 Score =  166 bits (419), Expect = 2e-39
 Identities = 86/121 (71%), Positives = 99/121 (81%), Gaps = 4/121 (3%)
 Frame = +3

Query: 3   QMDKLKSSPNAIILTTSNITAAIDVAFVDRADIKAYVGPPTVQARYEILRSCVQELIRTG 182
           QMDKLKSSPN IILTTSNITAAID+AFVDRADIKAYVGPPT+QARYEILRSC+QEL+RTG
Sbjct: 294 QMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELMRTG 353

Query: 183 ILTE----DHIFLPSYNSLRERLNVSDAHDSNTPPLHLAKQLLEAAEVCEGLSGRTLRKL 350
           ILT      ++  P+Y S ++RLN  D H+  T  + L KQLLE AE CEG+SGR+LRKL
Sbjct: 354 ILTSLQDCKNVMFPNYASAKDRLNTPDFHEDAT-FMQLCKQLLETAEACEGMSGRSLRKL 412

Query: 351 P 353
           P
Sbjct: 413 P 413


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