BLASTX nr result
ID: Cimicifuga21_contig00032492
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00032492 (355 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002511315.1| thyroid hormone receptor interactor, putativ... 170 1e-40 ref|XP_002318075.1| predicted protein [Populus trichocarpa] gi|1... 170 1e-40 ref|XP_002322204.1| predicted protein [Populus trichocarpa] gi|2... 168 5e-40 ref|XP_003601182.1| Thyroid receptor-interacting protein [Medica... 167 1e-39 ref|XP_003526996.1| PREDICTED: pachytene checkpoint protein 2 ho... 166 2e-39 >ref|XP_002511315.1| thyroid hormone receptor interactor, putative [Ricinus communis] gi|223550430|gb|EEF51917.1| thyroid hormone receptor interactor, putative [Ricinus communis] Length = 460 Score = 170 bits (430), Expect = 1e-40 Identities = 88/121 (72%), Positives = 104/121 (85%), Gaps = 4/121 (3%) Frame = +3 Query: 3 QMDKLKSSPNAIILTTSNITAAIDVAFVDRADIKAYVGPPTVQARYEILRSCVQELIRTG 182 QMDKLK SPN IILTTSNITAAID+AFVDRADIKAYVGPPT+QARYEILRSC+QELIRTG Sbjct: 306 QMDKLKCSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELIRTG 365 Query: 183 ILTE----DHIFLPSYNSLRERLNVSDAHDSNTPPLHLAKQLLEAAEVCEGLSGRTLRKL 350 I++ D++ LP+Y +L+E++N S A ++ T P+ L KQLLEAAE CEGLSGR+LRKL Sbjct: 366 IISNFQDPDNLVLPNYPTLKEKMNGSAAQEAQT-PVKLGKQLLEAAEACEGLSGRSLRKL 424 Query: 351 P 353 P Sbjct: 425 P 425 >ref|XP_002318075.1| predicted protein [Populus trichocarpa] gi|118485393|gb|ABK94553.1| unknown [Populus trichocarpa] gi|222858748|gb|EEE96295.1| predicted protein [Populus trichocarpa] Length = 465 Score = 170 bits (430), Expect = 1e-40 Identities = 86/121 (71%), Positives = 103/121 (85%), Gaps = 4/121 (3%) Frame = +3 Query: 3 QMDKLKSSPNAIILTTSNITAAIDVAFVDRADIKAYVGPPTVQARYEILRSCVQELIRTG 182 QMDKLK+SPN IILTTSNITAAID+AFVDRADIKAYVGPPT+QARYEILRSC+QEL+RTG Sbjct: 310 QMDKLKTSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELLRTG 369 Query: 183 ILT----EDHIFLPSYNSLRERLNVSDAHDSNTPPLHLAKQLLEAAEVCEGLSGRTLRKL 350 I++ D++ LP+Y++LRE+LN D ++ P L KQLLEAAE CEG+SGR+LRKL Sbjct: 370 IISNFQDSDYLMLPNYSTLREKLNAPDIQEAQ-PVLPFCKQLLEAAEACEGMSGRSLRKL 428 Query: 351 P 353 P Sbjct: 429 P 429 >ref|XP_002322204.1| predicted protein [Populus trichocarpa] gi|222869200|gb|EEF06331.1| predicted protein [Populus trichocarpa] Length = 410 Score = 168 bits (425), Expect = 5e-40 Identities = 87/121 (71%), Positives = 101/121 (83%), Gaps = 4/121 (3%) Frame = +3 Query: 3 QMDKLKSSPNAIILTTSNITAAIDVAFVDRADIKAYVGPPTVQARYEILRSCVQELIRTG 182 QMDKLK+SPN IILTTSNITAAID+AFVDRADIKAYVGPPT+QARYEILRSC+QEL+RTG Sbjct: 261 QMDKLKASPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELLRTG 320 Query: 183 ILT----EDHIFLPSYNSLRERLNVSDAHDSNTPPLHLAKQLLEAAEVCEGLSGRTLRKL 350 I++ DH+ LP Y++LRE+LN A P L+ KQLLEAAE CEG+SGR+LRKL Sbjct: 321 IVSNFQGSDHLVLPDYSTLREKLN---APTEAQPVLNFCKQLLEAAEACEGMSGRSLRKL 377 Query: 351 P 353 P Sbjct: 378 P 378 >ref|XP_003601182.1| Thyroid receptor-interacting protein [Medicago truncatula] gi|355490230|gb|AES71433.1| Thyroid receptor-interacting protein [Medicago truncatula] Length = 461 Score = 167 bits (422), Expect = 1e-39 Identities = 88/121 (72%), Positives = 103/121 (85%), Gaps = 4/121 (3%) Frame = +3 Query: 3 QMDKLKSSPNAIILTTSNITAAIDVAFVDRADIKAYVGPPTVQARYEILRSCVQELIRTG 182 QMDKLKSSPN IILTTSNITAAID+AFVDRADIKAYVGPPT+QARYEILRSCVQEL+RTG Sbjct: 307 QMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCVQELMRTG 366 Query: 183 ILT--ED--HIFLPSYNSLRERLNVSDAHDSNTPPLHLAKQLLEAAEVCEGLSGRTLRKL 350 ILT ED +I LP+Y S ++R+N D H++ T + L K+L+E AE CEG+SGR+LRKL Sbjct: 367 ILTNFEDCKNIMLPNYASAKQRMNAPDFHEATT-FMQLCKKLVETAEACEGMSGRSLRKL 425 Query: 351 P 353 P Sbjct: 426 P 426 >ref|XP_003526996.1| PREDICTED: pachytene checkpoint protein 2 homolog [Glycine max] Length = 448 Score = 166 bits (419), Expect = 2e-39 Identities = 86/121 (71%), Positives = 99/121 (81%), Gaps = 4/121 (3%) Frame = +3 Query: 3 QMDKLKSSPNAIILTTSNITAAIDVAFVDRADIKAYVGPPTVQARYEILRSCVQELIRTG 182 QMDKLKSSPN IILTTSNITAAID+AFVDRADIKAYVGPPT+QARYEILRSC+QEL+RTG Sbjct: 294 QMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELMRTG 353 Query: 183 ILTE----DHIFLPSYNSLRERLNVSDAHDSNTPPLHLAKQLLEAAEVCEGLSGRTLRKL 350 ILT ++ P+Y S ++RLN D H+ T + L KQLLE AE CEG+SGR+LRKL Sbjct: 354 ILTSLQDCKNVMFPNYASAKDRLNTPDFHEDAT-FMQLCKQLLETAEACEGMSGRSLRKL 412 Query: 351 P 353 P Sbjct: 413 P 413