BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032478
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    72   4e-11
ref|XP_004140601.1| PREDICTED: F-box protein At3g07870-like [Cuc...    72   5e-11
ref|XP_003611119.1| F-box family protein [Medicago truncatula] g...    72   6e-11
ref|XP_002534512.1| conserved hypothetical protein [Ricinus comm...    72   6e-11
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    71   8e-11

>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 47/129 (36%), Positives = 65/129 (50%), Gaps = 6/129 (4%)
 Frame = -2

Query: 370 ICNPITRQHTTLPKSPKHDTAPAVSGFGFDPTTKEYKVIRFL-----QNEYQKNADEQYY 206
           I NP T  +  LPKS ++     VSGFGF+P TKEYKVIR +        Y ++    Y 
Sbjct: 145 IYNPFTGCYKELPKSLQYPDQEVVSGFGFNPKTKEYKVIRIVYYRNGHGGYPRSRRIIYP 204

Query: 205 KAEAEL*TLGSENWKTIENAPYITDTSPFNQFVNGNLHWISYEDLSLLKSLIIVSFEMAT 26
            +E ++ TLG   W+++    Y          VNG LHWIS        +  +VSF++  
Sbjct: 205 LSEVQILTLGCPEWRSLGKVSYRLVRRASGALVNGRLHWIS-RPCRNKPARRLVSFDLTD 263

Query: 25  EKF-HVIKP 2
           E+F  V KP
Sbjct: 264 EQFREVSKP 272


>ref|XP_004140601.1| PREDICTED: F-box protein At3g07870-like [Cucumis sativus]
           gi|449519392|ref|XP_004166719.1| PREDICTED: F-box
           protein At3g07870-like [Cucumis sativus]
          Length = 375

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/118 (31%), Positives = 62/118 (52%)
 Frame = -2

Query: 370 ICNPITRQHTTLPKSPKHDTAPAVSGFGFDPTTKEYKVIRFLQNEYQKNADEQYYKAEAE 191
           I NP TR +  LPKS        V G GF P TK  K+++ + ++  +    +++ +E +
Sbjct: 115 IYNPFTRDYLELPKSKDFSNPDVVYGIGFHPQTKRLKILKIVYSKGFRRIQRRFHHSEVQ 174

Query: 190 L*TLGSENWKTIENAPYITDTSPFNQFVNGNLHWISYEDLSLLKSLIIVSFEMATEKF 17
           + TLG+ NW++I    +          +NG LHW+S      +    IVSF++A+E+F
Sbjct: 175 VFTLGTSNWRSIGRIFHHLAQGQSPAAINGRLHWVSLPRRHYV-GRTIVSFDLASEEF 231


>ref|XP_003611119.1| F-box family protein [Medicago truncatula]
           gi|355512454|gb|AES94077.1| F-box family protein
           [Medicago truncatula]
          Length = 560

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 45/118 (38%), Positives = 67/118 (56%), Gaps = 6/118 (5%)
 Frame = -2

Query: 370 ICNPITRQHTTLPK----SPKHDTAPAVSGFGFDPTTKEYKVIRFLQNEYQKNADEQYY- 206
           ICNP+TR+ T LP+    S   ++A   +GFGF P T EYKVI  + N+Y +  +   + 
Sbjct: 282 ICNPVTREFTILPELTTTSDWFNSARVQAGFGFQPKTNEYKVI-IMWNKYVRRDNRLVFE 340

Query: 205 KAEAEL*TLGSENWKTIENAPYITDTSPFN-QFVNGNLHWISYEDLSLLKSLIIVSFE 35
           +   E+ TLG+ +W+ +E  P I+     N   VNG LHWI +E     KS++  +FE
Sbjct: 341 RVVLEIHTLGTSSWRNVEVDPQISFLKLLNPTCVNGALHWIIFEAWQ-QKSILCFNFE 397


>ref|XP_002534512.1| conserved hypothetical protein [Ricinus communis]
           gi|223525141|gb|EEF27869.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 383

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
 Frame = -2

Query: 364 NPITRQHTTLPKSPKHDTAPAVSGFGFDPTTKEYKVIRFLQNEYQKN-ADEQY---YKAE 197
           NP T     LP S        V GFGFDP  K+YKV++        N A E+Y    ++E
Sbjct: 129 NPFTNSCMELPISNFPSDVWTVLGFGFDPVRKKYKVLKVSYIRRTNNTAGERYGLSLRSE 188

Query: 196 AEL*TLGSENWKTIENAPYITDTSPFNQFVNGNLHWISYEDLSLLKSLIIVSFEMATEKF 17
            ++ T+GS +W+++   PY    SP   +VNG LHW+++  +       ++SF++  EKF
Sbjct: 189 VQILTVGSPSWRSLGETPYYPIHSPSQVYVNGRLHWVNW-PVRYRPGRKLISFDLEDEKF 247

Query: 16  HVI 8
             +
Sbjct: 248 REV 250


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 8/127 (6%)
 Frame = -2

Query: 364 NPITRQHTTLPKSPKHDTAPAVSGFGFDPTTKEYKVIRFLQNEYQKNADEQYYK------ 203
           NP TR    LPKS ++     V GFG+ P T+ YKV++ +   Y +N    + +      
Sbjct: 147 NPFTRDFKQLPKSLQYPDQEVVFGFGYHPMTEVYKVVKVV---YYRNGYGGFSRFRRITC 203

Query: 202 --AEAEL*TLGSENWKTIENAPYITDTSPFNQFVNGNLHWISYEDLSLLKSLIIVSFEMA 29
             +E ++ TLGS  W+++    Y  D  P    VNG LHW++     + +   IVSF++A
Sbjct: 204 SQSEVQVLTLGSPTWRSLGKVSYQLDRWPSEALVNGRLHWVTRPRRYVTR--FIVSFDLA 261

Query: 28  TEKFHVI 8
            E+F  I
Sbjct: 262 DEQFREI 268