BLASTX nr result

ID: Cimicifuga21_contig00032475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032475
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269004.1| PREDICTED: putative B3 domain-containing pro...    66   3e-09
ref|XP_003559664.1| PREDICTED: LOW QUALITY PROTEIN: B3 domain-co...    64   1e-08
ref|XP_002466799.1| hypothetical protein SORBIDRAFT_01g014370 [S...    61   8e-08
ref|XP_002269140.2| PREDICTED: B3 domain-containing protein Os11...    60   2e-07
emb|CAN64872.1| hypothetical protein VITISV_026093 [Vitis vinifera]    60   2e-07

>ref|XP_002269004.1| PREDICTED: putative B3 domain-containing protein Os03g0621600-like
           [Vitis vinifera]
          Length = 390

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/75 (45%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
 Frame = +2

Query: 92  SFFKVMVADFHIQLCLPQAYIKNFNGNLP-KKLILRRPGGGSWMVSVKGDEDSLILCNEW 268
           SFFKVM+ DF   L +P A++K+F+G LP K LI+R PG   W V V+  +        W
Sbjct: 15  SFFKVMMGDFSKDLRIPPAFVKHFDGVLPHKSLIMRNPGSKVWCVYVQKVDRCFFFEKGW 74

Query: 269 KTFAEENALEFGDFL 313
             F ++N LE GDFL
Sbjct: 75  GKFVQDNFLELGDFL 89


>ref|XP_003559664.1| PREDICTED: LOW QUALITY PROTEIN: B3 domain-containing protein
           Os03g0622200-like [Brachypodium distachyon]
          Length = 642

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 6/84 (7%)
 Frame = +2

Query: 80  WSTMS-----FFKVMVADFHIQLCLPQAYIKNFNGNLPKKLILRRPGGGSWMVSVKGDE- 241
           WS M+     FFK MV DF   + +P  + KNFNG++ +++ L+ P G SW + V  D  
Sbjct: 17  WSHMADENKHFFKFMVGDFTESMSIPDEFAKNFNGHISEEVNLKFPSGKSWSIEVASDTG 76

Query: 242 DSLILCNEWKTFAEENALEFGDFL 313
           D+++L + WK F   +++E GD L
Sbjct: 77  DAVLLRSGWKEFVSAHSIEQGDCL 100


>ref|XP_002466799.1| hypothetical protein SORBIDRAFT_01g014370 [Sorghum bicolor]
           gi|241920653|gb|EER93797.1| hypothetical protein
           SORBIDRAFT_01g014370 [Sorghum bicolor]
          Length = 354

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 25/71 (35%), Positives = 42/71 (59%)
 Frame = +2

Query: 95  FFKVMVADFHIQLCLPQAYIKNFNGNLPKKLILRRPGGGSWMVSVKGDEDSLILCNEWKT 274
           FFK MV DF   + +P  +  NFNG++ + + L+ P G +W + V  D D ++L + WK 
Sbjct: 8   FFKPMVGDFTETMSIPARFANNFNGHISEVISLKSPSGKTWSIGVGSDTDEVVLQSGWKE 67

Query: 275 FAEENALEFGD 307
           F   ++++ GD
Sbjct: 68  FVSAHSIDEGD 78


>ref|XP_002269140.2| PREDICTED: B3 domain-containing protein Os11g0197600-like [Vitis
           vinifera]
          Length = 598

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/74 (39%), Positives = 42/74 (56%)
 Frame = +2

Query: 92  SFFKVMVADFHIQLCLPQAYIKNFNGNLPKKLILRRPGGGSWMVSVKGDEDSLILCNEWK 271
           SFFKV++ DF  +L +P A++K F        +L+   G SWMVSVK ++        W+
Sbjct: 10  SFFKVLIGDFTNKLRIPPAFMKKFRRMTFNNAVLKTVTGESWMVSVKQEDSCYFFKKGWR 69

Query: 272 TFAEENALEFGDFL 313
            F ++  LE GDFL
Sbjct: 70  KFVKDQHLEAGDFL 83


>emb|CAN64872.1| hypothetical protein VITISV_026093 [Vitis vinifera]
          Length = 262

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/74 (39%), Positives = 42/74 (56%)
 Frame = +2

Query: 92  SFFKVMVADFHIQLCLPQAYIKNFNGNLPKKLILRRPGGGSWMVSVKGDEDSLILCNEWK 271
           SFFKV++ DF  +L +P A++K F        +L+   G SWMVSVK ++        W+
Sbjct: 10  SFFKVLIGDFTNKLRIPPAFMKKFRRMTFNNAVLKTVTGESWMVSVKQEDSCYFFKKGWR 69

Query: 272 TFAEENALEFGDFL 313
            F ++  LE GDFL
Sbjct: 70  KFVKDQHLEAGDFL 83


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