BLASTX nr result

ID: Cimicifuga21_contig00032450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032450
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318856.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_002271141.1| PREDICTED: transcription factor bHLH120 [Vit...    60   1e-07
ref|XP_002321864.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_002299575.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
ref|XP_002869672.1| basix helix-loop-helix family protein [Arabi...    56   3e-06

>ref|XP_002318856.1| predicted protein [Populus trichocarpa] gi|222859529|gb|EEE97076.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/66 (42%), Positives = 46/66 (69%)
 Frame = -3

Query: 375 GVEVIISSDSKGRGLPLSKVLNEMVREGLILSSCISAEVNETTFHTIRSEVINWEAFDLS 196
           G+EV+  SD +G+  PLS+VL  ++ EG+ + +C+S +VNE  FHT+++EV +    +LS
Sbjct: 169 GIEVVFDSDFRGQDSPLSRVLQVLLEEGISVVNCVSTKVNERLFHTVQTEVNDPACLNLS 228

Query: 195 ALQHKL 178
            L+ KL
Sbjct: 229 ELRQKL 234


>ref|XP_002271141.1| PREDICTED: transcription factor bHLH120 [Vitis vinifera]
           gi|296084088|emb|CBI24476.3| unnamed protein product
           [Vitis vinifera]
          Length = 247

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/66 (43%), Positives = 42/66 (63%)
 Frame = -3

Query: 375 GVEVIISSDSKGRGLPLSKVLNEMVREGLILSSCISAEVNETTFHTIRSEVINWEAFDLS 196
           GVE+++SS  +  G+PLS+ L  ++ EGL + SCIS +VN    HTI  EV +  + DL 
Sbjct: 159 GVEIVVSSGGEKEGMPLSRALETLLEEGLSVISCISTKVNGRLLHTIHCEVSDITSIDLH 218

Query: 195 ALQHKL 178
            LQ +L
Sbjct: 219 GLQQQL 224


>ref|XP_002321864.1| predicted protein [Populus trichocarpa] gi|222868860|gb|EEF05991.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/66 (42%), Positives = 44/66 (66%)
 Frame = -3

Query: 375 GVEVIISSDSKGRGLPLSKVLNEMVREGLILSSCISAEVNETTFHTIRSEVINWEAFDLS 196
           G+E+   SD  GR LPLS+VL  ++ EG+ + +C+S +VNE  FH++++EV +    +LS
Sbjct: 169 GIEITFDSDLMGRDLPLSRVLQVLLEEGISVINCVSTKVNERLFHSVQTEVNDPTCLNLS 228

Query: 195 ALQHKL 178
            L  KL
Sbjct: 229 ELWQKL 234


>ref|XP_002299575.1| predicted protein [Populus trichocarpa] gi|222846833|gb|EEE84380.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/66 (48%), Positives = 43/66 (65%)
 Frame = -3

Query: 375 GVEVIISSDSKGRGLPLSKVLNEMVREGLILSSCISAEVNETTFHTIRSEVINWEAFDLS 196
           GVEV I++  K +G PLS+VL  ++ EG  + SCIS +VNE   H I SEV +  + D+S
Sbjct: 172 GVEVDINTALK-KGFPLSRVLAILIEEGFSVVSCISTKVNERMLHNIISEVTDGRSLDIS 230

Query: 195 ALQHKL 178
            LQ KL
Sbjct: 231 ELQQKL 236


>ref|XP_002869672.1| basix helix-loop-helix family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297315508|gb|EFH45931.1| basix
           helix-loop-helix family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 222

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
 Frame = -3

Query: 375 GVEVIISSDSKG-RGLPLSKVLNEMVREGLILSSCISAEVNETTFHTIRSEVINWEAFDL 199
           G+EV++SS S G   LPLS+VL  +  +GL + S ++  VNE   HTI+ EV ++   DL
Sbjct: 146 GLEVVVSSKSSGPEALPLSRVLETLQEKGLEVMSSLTTRVNERLMHTIQVEVNSFGCIDL 205

Query: 198 SALQHKLI 175
           + LQ KL+
Sbjct: 206 AWLQQKLV 213


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