BLASTX nr result
ID: Cimicifuga21_contig00032450
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00032450 (377 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002318856.1| predicted protein [Populus trichocarpa] gi|2... 62 4e-08 ref|XP_002271141.1| PREDICTED: transcription factor bHLH120 [Vit... 60 1e-07 ref|XP_002321864.1| predicted protein [Populus trichocarpa] gi|2... 60 1e-07 ref|XP_002299575.1| predicted protein [Populus trichocarpa] gi|2... 57 1e-06 ref|XP_002869672.1| basix helix-loop-helix family protein [Arabi... 56 3e-06 >ref|XP_002318856.1| predicted protein [Populus trichocarpa] gi|222859529|gb|EEE97076.1| predicted protein [Populus trichocarpa] Length = 240 Score = 62.4 bits (150), Expect = 4e-08 Identities = 28/66 (42%), Positives = 46/66 (69%) Frame = -3 Query: 375 GVEVIISSDSKGRGLPLSKVLNEMVREGLILSSCISAEVNETTFHTIRSEVINWEAFDLS 196 G+EV+ SD +G+ PLS+VL ++ EG+ + +C+S +VNE FHT+++EV + +LS Sbjct: 169 GIEVVFDSDFRGQDSPLSRVLQVLLEEGISVVNCVSTKVNERLFHTVQTEVNDPACLNLS 228 Query: 195 ALQHKL 178 L+ KL Sbjct: 229 ELRQKL 234 >ref|XP_002271141.1| PREDICTED: transcription factor bHLH120 [Vitis vinifera] gi|296084088|emb|CBI24476.3| unnamed protein product [Vitis vinifera] Length = 247 Score = 60.5 bits (145), Expect = 1e-07 Identities = 29/66 (43%), Positives = 42/66 (63%) Frame = -3 Query: 375 GVEVIISSDSKGRGLPLSKVLNEMVREGLILSSCISAEVNETTFHTIRSEVINWEAFDLS 196 GVE+++SS + G+PLS+ L ++ EGL + SCIS +VN HTI EV + + DL Sbjct: 159 GVEIVVSSGGEKEGMPLSRALETLLEEGLSVISCISTKVNGRLLHTIHCEVSDITSIDLH 218 Query: 195 ALQHKL 178 LQ +L Sbjct: 219 GLQQQL 224 >ref|XP_002321864.1| predicted protein [Populus trichocarpa] gi|222868860|gb|EEF05991.1| predicted protein [Populus trichocarpa] Length = 246 Score = 60.5 bits (145), Expect = 1e-07 Identities = 28/66 (42%), Positives = 44/66 (66%) Frame = -3 Query: 375 GVEVIISSDSKGRGLPLSKVLNEMVREGLILSSCISAEVNETTFHTIRSEVINWEAFDLS 196 G+E+ SD GR LPLS+VL ++ EG+ + +C+S +VNE FH++++EV + +LS Sbjct: 169 GIEITFDSDLMGRDLPLSRVLQVLLEEGISVINCVSTKVNERLFHSVQTEVNDPTCLNLS 228 Query: 195 ALQHKL 178 L KL Sbjct: 229 ELWQKL 234 >ref|XP_002299575.1| predicted protein [Populus trichocarpa] gi|222846833|gb|EEE84380.1| predicted protein [Populus trichocarpa] Length = 241 Score = 57.4 bits (137), Expect = 1e-06 Identities = 32/66 (48%), Positives = 43/66 (65%) Frame = -3 Query: 375 GVEVIISSDSKGRGLPLSKVLNEMVREGLILSSCISAEVNETTFHTIRSEVINWEAFDLS 196 GVEV I++ K +G PLS+VL ++ EG + SCIS +VNE H I SEV + + D+S Sbjct: 172 GVEVDINTALK-KGFPLSRVLAILIEEGFSVVSCISTKVNERMLHNIISEVTDGRSLDIS 230 Query: 195 ALQHKL 178 LQ KL Sbjct: 231 ELQQKL 236 >ref|XP_002869672.1| basix helix-loop-helix family protein [Arabidopsis lyrata subsp. lyrata] gi|297315508|gb|EFH45931.1| basix helix-loop-helix family protein [Arabidopsis lyrata subsp. lyrata] Length = 222 Score = 55.8 bits (133), Expect = 3e-06 Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 1/68 (1%) Frame = -3 Query: 375 GVEVIISSDSKG-RGLPLSKVLNEMVREGLILSSCISAEVNETTFHTIRSEVINWEAFDL 199 G+EV++SS S G LPLS+VL + +GL + S ++ VNE HTI+ EV ++ DL Sbjct: 146 GLEVVVSSKSSGPEALPLSRVLETLQEKGLEVMSSLTTRVNERLMHTIQVEVNSFGCIDL 205 Query: 198 SALQHKLI 175 + LQ KL+ Sbjct: 206 AWLQQKLV 213