BLASTX nr result

ID: Cimicifuga21_contig00032447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032447
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509459.1| hypothetical protein RCOM_1674130 [Ricinus c...   153   2e-35
gb|ADO16343.1| leafy cotyledon 2 [Brassica napus]                     150   1e-34
gb|AAL12004.1|AF400123_1 LEAFY COTYLEDON 2 [Arabidopsis thaliana...   145   6e-33
gb|ABK28418.1| unknown [Arabidopsis thaliana]                         145   6e-33
ref|NP_564304.1| B3 domain-containing transcription factor LEC2 ...   145   6e-33

>ref|XP_002509459.1| hypothetical protein RCOM_1674130 [Ricinus communis]
           gi|223549358|gb|EEF50846.1| hypothetical protein
           RCOM_1674130 [Ricinus communis]
          Length = 418

 Score =  153 bits (387), Expect = 2e-35
 Identities = 68/131 (51%), Positives = 98/131 (74%)
 Frame = +3

Query: 9   TENVDNKDVYNFTTPDGKKLKFVLQKELKNSDIGSIGRIVLPKKPSEEHLPNLSDKEGIQ 188
           +++   +D+Y F TPD KKL+ +L+K+LK SD+GS+GRIVLPK+ +EE+LP LSDKEGI 
Sbjct: 143 SQSTSKRDLYKFCTPDNKKLRVLLRKDLKTSDVGSLGRIVLPKREAEENLPILSDKEGIL 202

Query: 189 ITVREVESTKVWEMRYRYWSNNKSRMYILENTGKYVRQNELTTGDYVMIYKDEENQLYIS 368
           + +R+V STK W ++Y+YWSNNKSRMY+LENTG +V+QN +  GD + +Y+DE  +L  +
Sbjct: 203 VAIRDVCSTKEWSLKYKYWSNNKSRMYVLENTGDFVKQNGMRIGDSLTLYEDESKKLLCT 262

Query: 369 CKKAKTSTSVP 401
               +T    P
Sbjct: 263 HSTEETGEVFP 273


>gb|ADO16343.1| leafy cotyledon 2 [Brassica napus]
          Length = 349

 Score =  150 bits (380), Expect = 1e-34
 Identities = 70/135 (51%), Positives = 97/135 (71%)
 Frame = +3

Query: 27  KDVYNFTTPDGKKLKFVLQKELKNSDIGSIGRIVLPKKPSEEHLPNLSDKEGIQITVREV 206
           KD Y F++ D KKL+ +L K LKNSD+GS+GRIVLPK+ +E +LP LSDKEG+ + +R+V
Sbjct: 148 KDFYRFSSFDNKKLRVLLVKHLKNSDVGSLGRIVLPKREAEGNLPELSDKEGMVLEMRDV 207

Query: 207 ESTKVWEMRYRYWSNNKSRMYILENTGKYVRQNELTTGDYVMIYKDEENQLYISCKKAKT 386
           +S + W  +Y+YWSNNKSRMY+LENTG++V++N +  GDY+ IY+DE   LY S +K   
Sbjct: 208 DSVQSWSFKYKYWSNNKSRMYVLENTGEFVKKNGVLMGDYLTIYEDESKNLYFSIRKHPH 267

Query: 387 STSVPVNDESQRGAE 431
             +    DES    E
Sbjct: 268 KQNDGREDESMEVIE 282


>gb|AAL12004.1|AF400123_1 LEAFY COTYLEDON 2 [Arabidopsis thaliana]
           gi|15987518|gb|AAL12005.1|AF400124_1 LEAFY COTYLEDON 2
           [Arabidopsis thaliana] gi|45935047|gb|AAS79558.1| leafy
           cotyledon 2 [Arabidopsis thaliana]
           gi|46367486|emb|CAG25869.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 362

 Score =  145 bits (365), Expect = 6e-33
 Identities = 65/116 (56%), Positives = 89/116 (76%)
 Frame = +3

Query: 21  DNKDVYNFTTPDGKKLKFVLQKELKNSDIGSIGRIVLPKKPSEEHLPNLSDKEGIQITVR 200
           D KD Y  +T D KKL+ + +KELKNSD+GS+GRIVLPK+ +E +LP LSDKEGI + +R
Sbjct: 152 DKKDSYQQSTFDNKKLRVLCEKELKNSDVGSLGRIVLPKRDAEANLPKLSDKEGIVVQMR 211

Query: 201 EVESTKVWEMRYRYWSNNKSRMYILENTGKYVRQNELTTGDYVMIYKDEENQLYIS 368
           +V S + W  +Y++WSNNKSRMY+LENTG++V+QN    GD++ IY+DE   LY +
Sbjct: 212 DVFSMQSWSFKYKFWSNNKSRMYVLENTGEFVKQNGAEIGDFLTIYEDESKNLYFA 267


>gb|ABK28418.1| unknown [Arabidopsis thaliana]
          Length = 364

 Score =  145 bits (365), Expect = 6e-33
 Identities = 65/116 (56%), Positives = 89/116 (76%)
 Frame = +3

Query: 21  DNKDVYNFTTPDGKKLKFVLQKELKNSDIGSIGRIVLPKKPSEEHLPNLSDKEGIQITVR 200
           D KD Y  +T D KKL+ + +KELKNSD+GS+GRIVLPK+ +E +LP LSDKEGI + +R
Sbjct: 152 DKKDSYQQSTFDNKKLRVLCEKELKNSDVGSLGRIVLPKRDAEANLPKLSDKEGIVVQMR 211

Query: 201 EVESTKVWEMRYRYWSNNKSRMYILENTGKYVRQNELTTGDYVMIYKDEENQLYIS 368
           +V S + W  +Y++WSNNKSRMY+LENTG++V+QN    GD++ IY+DE   LY +
Sbjct: 212 DVFSMQSWSFKYKFWSNNKSRMYVLENTGEFVKQNGAEIGDFLTIYEDESKNLYFA 267


>ref|NP_564304.1| B3 domain-containing transcription factor LEC2 [Arabidopsis
           thaliana] gi|122180358|sp|Q1PFR7.1|LEC2_ARATH RecName:
           Full=B3 domain-containing transcription factor LEC2;
           AltName: Full=Protein LEAFY COTYLEDON 2
           gi|91805863|gb|ABE65660.1| transcriptional factor B3
           family protein/leafy cotyledon 2 [Arabidopsis thaliana]
           gi|332192824|gb|AEE30945.1| B3 domain-containing
           transcription factor LEC2 [Arabidopsis thaliana]
          Length = 363

 Score =  145 bits (365), Expect = 6e-33
 Identities = 65/116 (56%), Positives = 89/116 (76%)
 Frame = +3

Query: 21  DNKDVYNFTTPDGKKLKFVLQKELKNSDIGSIGRIVLPKKPSEEHLPNLSDKEGIQITVR 200
           D KD Y  +T D KKL+ + +KELKNSD+GS+GRIVLPK+ +E +LP LSDKEGI + +R
Sbjct: 152 DKKDSYQQSTFDNKKLRVLCEKELKNSDVGSLGRIVLPKRDAEANLPKLSDKEGIVVQMR 211

Query: 201 EVESTKVWEMRYRYWSNNKSRMYILENTGKYVRQNELTTGDYVMIYKDEENQLYIS 368
           +V S + W  +Y++WSNNKSRMY+LENTG++V+QN    GD++ IY+DE   LY +
Sbjct: 212 DVFSMQSWSFKYKFWSNNKSRMYVLENTGEFVKQNGAEIGDFLTIYEDESKNLYFA 267


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