BLASTX nr result

ID: Cimicifuga21_contig00032433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032433
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635142.1| PREDICTED: uncharacterized protein LOC100244...    87   2e-15
emb|CBI18563.3| unnamed protein product [Vitis vinifera]               87   2e-15
ref|XP_002310753.1| f-box family protein [Populus trichocarpa] g...    83   3e-14
gb|ADL36685.1| DOF domain class transcription factor [Malus x do...    75   7e-12
emb|CAN72540.1| hypothetical protein VITISV_028751 [Vitis vinifera]    71   8e-11

>ref|XP_003635142.1| PREDICTED: uncharacterized protein LOC100244391 [Vitis vinifera]
          Length = 332

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 47/87 (54%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
 Frame = -1

Query: 265 KPKFGAGIDHDQSTNQILWGSPQNSQLLALLRATXXXXXXXXXXXNFVNIKDEGHMIGSH 86
           K   G G DH+  +N ILW SPQNS LLALLRAT           N V +KD+G MIGSH
Sbjct: 142 KSGLGGGFDHEIPSNPILWASPQNSHLLALLRATQNPNPNPSPISNSVTVKDDGVMIGSH 201

Query: 85  VSSESAVVTGALN-ARTLGLDPMGQVP 8
           ++SES V TGA+N AR +GLD + Q+P
Sbjct: 202 MTSESGVGTGAVNIARNMGLDHLNQLP 228


>emb|CBI18563.3| unnamed protein product [Vitis vinifera]
          Length = 425

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 47/87 (54%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
 Frame = -1

Query: 265 KPKFGAGIDHDQSTNQILWGSPQNSQLLALLRATXXXXXXXXXXXNFVNIKDEGHMIGSH 86
           K   G G DH+  +N ILW SPQNS LLALLRAT           N V +KD+G MIGSH
Sbjct: 215 KSGLGGGFDHEIPSNPILWASPQNSHLLALLRATQNPNPNPSPISNSVTVKDDGVMIGSH 274

Query: 85  VSSESAVVTGALN-ARTLGLDPMGQVP 8
           ++SES V TGA+N AR +GLD + Q+P
Sbjct: 275 MTSESGVGTGAVNIARNMGLDHLNQLP 301


>ref|XP_002310753.1| f-box family protein [Populus trichocarpa]
           gi|118482074|gb|ABK92968.1| unknown [Populus
           trichocarpa] gi|222853656|gb|EEE91203.1| f-box family
           protein [Populus trichocarpa]
          Length = 323

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 44/83 (53%), Positives = 54/83 (65%)
 Frame = -1

Query: 256 FGAGIDHDQSTNQILWGSPQNSQLLALLRATXXXXXXXXXXXNFVNIKDEGHMIGSHVSS 77
           FG G +H+ S++ I+W SPQNS +LALLRAT            FV  K+EG +IG+   S
Sbjct: 146 FGNGFEHELSSSPIMWASPQNSHILALLRATQNPNPSTLSNSIFV--KEEGGLIGNQFIS 203

Query: 76  ESAVVTGALNARTLGLDPMGQVP 8
           E  V T ALNARTLGLDP+ QVP
Sbjct: 204 EPGVGTAALNARTLGLDPISQVP 226


>gb|ADL36685.1| DOF domain class transcription factor [Malus x domestica]
          Length = 346

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
 Frame = -1

Query: 256 FGAGIDHDQSTNQILWGSPQNSQLLALLRATXXXXXXXXXXXNFVNIKDEG--HMIGSHV 83
           FGAG D +   + ILWGSPQNS LLALL+A+           N VN+K+EG  +MIGSH+
Sbjct: 147 FGAGFDQEVQASPILWGSPQNSHLLALLKASHHQNPNPNQLCNSVNVKEEGGMNMIGSHM 206

Query: 82  SSESAVVTGALNARTLGLDPMGQVP 8
            +  A+      ARTLGLDP+ Q P
Sbjct: 207 MTTEAIAMS--TARTLGLDPVCQAP 229


>emb|CAN72540.1| hypothetical protein VITISV_028751 [Vitis vinifera]
          Length = 309

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 40/79 (50%), Positives = 48/79 (60%)
 Frame = -1

Query: 265 KPKFGAGIDHDQSTNQILWGSPQNSQLLALLRATXXXXXXXXXXXNFVNIKDEGHMIGSH 86
           K   G G DH+  +N ILW SPQNS LLALLRAT           N V +KD+G MIGSH
Sbjct: 142 KSGLGGGFDHEIPSNPILWASPQNSHLLALLRATQNPNPNPSPISNSVTVKDDGVMIGSH 201

Query: 85  VSSESAVVTGALNARTLGL 29
           ++SES V T AL   T+ +
Sbjct: 202 MTSESGVGT-ALTGETINI 219


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