BLASTX nr result
ID: Cimicifuga21_contig00032433
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00032433 (268 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003635142.1| PREDICTED: uncharacterized protein LOC100244... 87 2e-15 emb|CBI18563.3| unnamed protein product [Vitis vinifera] 87 2e-15 ref|XP_002310753.1| f-box family protein [Populus trichocarpa] g... 83 3e-14 gb|ADL36685.1| DOF domain class transcription factor [Malus x do... 75 7e-12 emb|CAN72540.1| hypothetical protein VITISV_028751 [Vitis vinifera] 71 8e-11 >ref|XP_003635142.1| PREDICTED: uncharacterized protein LOC100244391 [Vitis vinifera] Length = 332 Score = 86.7 bits (213), Expect = 2e-15 Identities = 47/87 (54%), Positives = 57/87 (65%), Gaps = 1/87 (1%) Frame = -1 Query: 265 KPKFGAGIDHDQSTNQILWGSPQNSQLLALLRATXXXXXXXXXXXNFVNIKDEGHMIGSH 86 K G G DH+ +N ILW SPQNS LLALLRAT N V +KD+G MIGSH Sbjct: 142 KSGLGGGFDHEIPSNPILWASPQNSHLLALLRATQNPNPNPSPISNSVTVKDDGVMIGSH 201 Query: 85 VSSESAVVTGALN-ARTLGLDPMGQVP 8 ++SES V TGA+N AR +GLD + Q+P Sbjct: 202 MTSESGVGTGAVNIARNMGLDHLNQLP 228 >emb|CBI18563.3| unnamed protein product [Vitis vinifera] Length = 425 Score = 86.7 bits (213), Expect = 2e-15 Identities = 47/87 (54%), Positives = 57/87 (65%), Gaps = 1/87 (1%) Frame = -1 Query: 265 KPKFGAGIDHDQSTNQILWGSPQNSQLLALLRATXXXXXXXXXXXNFVNIKDEGHMIGSH 86 K G G DH+ +N ILW SPQNS LLALLRAT N V +KD+G MIGSH Sbjct: 215 KSGLGGGFDHEIPSNPILWASPQNSHLLALLRATQNPNPNPSPISNSVTVKDDGVMIGSH 274 Query: 85 VSSESAVVTGALN-ARTLGLDPMGQVP 8 ++SES V TGA+N AR +GLD + Q+P Sbjct: 275 MTSESGVGTGAVNIARNMGLDHLNQLP 301 >ref|XP_002310753.1| f-box family protein [Populus trichocarpa] gi|118482074|gb|ABK92968.1| unknown [Populus trichocarpa] gi|222853656|gb|EEE91203.1| f-box family protein [Populus trichocarpa] Length = 323 Score = 82.8 bits (203), Expect = 3e-14 Identities = 44/83 (53%), Positives = 54/83 (65%) Frame = -1 Query: 256 FGAGIDHDQSTNQILWGSPQNSQLLALLRATXXXXXXXXXXXNFVNIKDEGHMIGSHVSS 77 FG G +H+ S++ I+W SPQNS +LALLRAT FV K+EG +IG+ S Sbjct: 146 FGNGFEHELSSSPIMWASPQNSHILALLRATQNPNPSTLSNSIFV--KEEGGLIGNQFIS 203 Query: 76 ESAVVTGALNARTLGLDPMGQVP 8 E V T ALNARTLGLDP+ QVP Sbjct: 204 EPGVGTAALNARTLGLDPISQVP 226 >gb|ADL36685.1| DOF domain class transcription factor [Malus x domestica] Length = 346 Score = 74.7 bits (182), Expect = 7e-12 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 2/85 (2%) Frame = -1 Query: 256 FGAGIDHDQSTNQILWGSPQNSQLLALLRATXXXXXXXXXXXNFVNIKDEG--HMIGSHV 83 FGAG D + + ILWGSPQNS LLALL+A+ N VN+K+EG +MIGSH+ Sbjct: 147 FGAGFDQEVQASPILWGSPQNSHLLALLKASHHQNPNPNQLCNSVNVKEEGGMNMIGSHM 206 Query: 82 SSESAVVTGALNARTLGLDPMGQVP 8 + A+ ARTLGLDP+ Q P Sbjct: 207 MTTEAIAMS--TARTLGLDPVCQAP 229 >emb|CAN72540.1| hypothetical protein VITISV_028751 [Vitis vinifera] Length = 309 Score = 71.2 bits (173), Expect = 8e-11 Identities = 40/79 (50%), Positives = 48/79 (60%) Frame = -1 Query: 265 KPKFGAGIDHDQSTNQILWGSPQNSQLLALLRATXXXXXXXXXXXNFVNIKDEGHMIGSH 86 K G G DH+ +N ILW SPQNS LLALLRAT N V +KD+G MIGSH Sbjct: 142 KSGLGGGFDHEIPSNPILWASPQNSHLLALLRATQNPNPNPSPISNSVTVKDDGVMIGSH 201 Query: 85 VSSESAVVTGALNARTLGL 29 ++SES V T AL T+ + Sbjct: 202 MTSESGVGT-ALTGETINI 219