BLASTX nr result

ID: Cimicifuga21_contig00032429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032429
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280977.1| PREDICTED: auxin-induced protein 5NG4 [Vitis...    90   2e-16
emb|CBI37093.3| unnamed protein product [Vitis vinifera]               85   7e-15
ref|XP_003536248.1| PREDICTED: auxin-induced protein 5NG4 [Glyci...    82   6e-14
ref|XP_002529296.1| Auxin-induced protein 5NG4, putative [Ricinu...    81   1e-13
ref|NP_001142624.1| uncharacterized protein LOC100274895 [Zea ma...    80   1e-13

>ref|XP_002280977.1| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera]
           gi|296083618|emb|CBI23607.3| unnamed protein product
           [Vitis vinifera]
          Length = 368

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 40/50 (80%), Positives = 47/50 (94%)
 Frame = -2

Query: 220 GRVCSGLIIFIQLW*TEQRGPVFVTMFNPLSTIIVAILAYFVLGEKMYTG 71
           G VCSGLIIF+QLW TE++GPVFVTMFNPLST++VA+LAYFVLGEK+Y G
Sbjct: 260 GVVCSGLIIFVQLWCTEEKGPVFVTMFNPLSTVLVAVLAYFVLGEKLYMG 309


>emb|CBI37093.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 42/66 (63%), Positives = 51/66 (77%)
 Frame = -2

Query: 220 GRVCSGLIIFIQLW*TEQRGPVFVTMFNPLSTIIVAILAYFVLGEKMYTGRQTYFYSYII 41
           G VCSG++IF+ LW T+Q+GPVFVTMFNPLSTI+VA  AYFVLGEK+YTG        II
Sbjct: 265 GVVCSGIMIFLLLWCTKQKGPVFVTMFNPLSTIMVAFTAYFVLGEKLYTGSIVGAVIAII 324

Query: 40  SMKVLL 23
            + +LL
Sbjct: 325 GLYLLL 330


>ref|XP_003536248.1| PREDICTED: auxin-induced protein 5NG4 [Glycine max]
          Length = 354

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 42/66 (63%), Positives = 50/66 (75%)
 Frame = -2

Query: 220 GRVCSGLIIFIQLW*TEQRGPVFVTMFNPLSTIIVAILAYFVLGEKMYTGRQTYFYSYII 41
           G V +GLII+IQLW TE++GPVFVT+FNPLSTI+VAILAYFV GEK+Y G        II
Sbjct: 261 GVVVAGLIIYIQLWCTEKKGPVFVTVFNPLSTILVAILAYFVFGEKLYLGSIIGAIIVII 320

Query: 40  SMKVLL 23
            +  LL
Sbjct: 321 GLYFLL 326


>ref|XP_002529296.1| Auxin-induced protein 5NG4, putative [Ricinus communis]
           gi|223531220|gb|EEF33065.1| Auxin-induced protein 5NG4,
           putative [Ricinus communis]
          Length = 370

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 36/55 (65%), Positives = 47/55 (85%)
 Frame = -2

Query: 235 TMMVHGRVCSGLIIFIQLW*TEQRGPVFVTMFNPLSTIIVAILAYFVLGEKMYTG 71
           +++  G V SG ++FIQLW TE +GPVFVTMFNP+STI+VA++AYFVLGEK+Y G
Sbjct: 256 SILYGGVVMSGAVVFIQLWCTEVKGPVFVTMFNPVSTILVAVIAYFVLGEKLYLG 310


>ref|NP_001142624.1| uncharacterized protein LOC100274895 [Zea mays]
           gi|195607420|gb|ACG25540.1| hypothetical protein [Zea
           mays] gi|195644558|gb|ACG41747.1| hypothetical protein
           [Zea mays]
          Length = 242

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 34/55 (61%), Positives = 45/55 (81%)
 Frame = -2

Query: 235 TMMVHGRVCSGLIIFIQLW*TEQRGPVFVTMFNPLSTIIVAILAYFVLGEKMYTG 71
           +++  G  C+G  +F+QLW TE++GPVFVTMFNPLSTI+VAILAYF+ GE +Y G
Sbjct: 131 SIVYSGLACNGFTVFVQLWCTEKKGPVFVTMFNPLSTIMVAILAYFIFGENLYVG 185


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