BLASTX nr result

ID: Cimicifuga21_contig00032428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032428
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ83263.1| unknown [Medicago truncatula] gi|388498948|gb|AFK...   115   4e-24
ref|XP_002311057.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23
ref|XP_004150373.1| PREDICTED: ras-related protein RABC2a-like [...   112   3e-23
ref|XP_003556305.1| PREDICTED: ras-related protein RABC2a-like [...   111   7e-23
ref|XP_002316401.1| predicted protein [Populus trichocarpa] gi|1...   111   7e-23

>gb|ACJ83263.1| unknown [Medicago truncatula] gi|388498948|gb|AFK37540.1| unknown
           [Medicago truncatula]
          Length = 212

 Score =  115 bits (288), Expect = 4e-24
 Identities = 60/75 (80%), Positives = 67/75 (89%), Gaps = 4/75 (5%)
 Frame = +1

Query: 118 MGSS---GHGNYDYSFKILLIGDSGVGKSSLLLSFISNSVD-DNLSPTIGVDFKIKLLTV 285
           MGSS   G+ NYDYSFK+LLIGDSGVGKSSLLLSFISN+   D+LSPTIGVDFKIKL T+
Sbjct: 1   MGSSSKVGNSNYDYSFKVLLIGDSGVGKSSLLLSFISNANSLDDLSPTIGVDFKIKLFTI 60

Query: 286 GEKKLKLTIWDTAGQ 330
           G+K+LKLTIWDTAGQ
Sbjct: 61  GDKRLKLTIWDTAGQ 75


>ref|XP_002311057.1| predicted protein [Populus trichocarpa] gi|222850877|gb|EEE88424.1|
           predicted protein [Populus trichocarpa]
          Length = 214

 Score =  113 bits (283), Expect = 1e-23
 Identities = 58/73 (79%), Positives = 64/73 (87%)
 Frame = +1

Query: 112 GLMGSSGHGNYDYSFKILLIGDSGVGKSSLLLSFISNSVDDNLSPTIGVDFKIKLLTVGE 291
           G     G+ +YDYSFKILLIGDSGVGKSSLLLSFIS+SV D LSPTIGVDFK+K+LTVG 
Sbjct: 3   GSFSKGGNNSYDYSFKILLIGDSGVGKSSLLLSFISSSVRD-LSPTIGVDFKVKMLTVGG 61

Query: 292 KKLKLTIWDTAGQ 330
           K+LKLTIWDTAGQ
Sbjct: 62  KRLKLTIWDTAGQ 74


>ref|XP_004150373.1| PREDICTED: ras-related protein RABC2a-like [Cucumis sativus]
           gi|449513018|ref|XP_004164205.1| PREDICTED: ras-related
           protein RABC2a-like [Cucumis sativus]
          Length = 215

 Score =  112 bits (280), Expect = 3e-23
 Identities = 60/75 (80%), Positives = 66/75 (88%), Gaps = 3/75 (4%)
 Frame = +1

Query: 115 LMGSSGHG---NYDYSFKILLIGDSGVGKSSLLLSFISNSVDDNLSPTIGVDFKIKLLTV 285
           +MGSS  G   +YDYSFKILLIGDSGVGKSS+LLS+ISN V D LSPTIGVDFKIK++TV
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHD-LSPTIGVDFKIKMVTV 59

Query: 286 GEKKLKLTIWDTAGQ 330
           G KKLKLTIWDTAGQ
Sbjct: 60  GGKKLKLTIWDTAGQ 74


>ref|XP_003556305.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
          Length = 212

 Score =  111 bits (277), Expect = 7e-23
 Identities = 60/75 (80%), Positives = 63/75 (84%), Gaps = 4/75 (5%)
 Frame = +1

Query: 118 MGSS---GHGNYDYSFKILLIGDSGVGKSSLLLSFISNSVDDN-LSPTIGVDFKIKLLTV 285
           MGS    G  NYDYSFK+LL+GDSGVGKSSLLLSFISNS   N LSPTIGVDFKIKL TV
Sbjct: 1   MGSDSRVGSSNYDYSFKVLLVGDSGVGKSSLLLSFISNSNSINHLSPTIGVDFKIKLFTV 60

Query: 286 GEKKLKLTIWDTAGQ 330
           G K+LKLTIWDTAGQ
Sbjct: 61  GGKRLKLTIWDTAGQ 75


>ref|XP_002316401.1| predicted protein [Populus trichocarpa] gi|118482557|gb|ABK93199.1|
           unknown [Populus trichocarpa]
           gi|222865441|gb|EEF02572.1| predicted protein [Populus
           trichocarpa]
          Length = 212

 Score =  111 bits (277), Expect = 7e-23
 Identities = 58/73 (79%), Positives = 63/73 (86%)
 Frame = +1

Query: 112 GLMGSSGHGNYDYSFKILLIGDSGVGKSSLLLSFISNSVDDNLSPTIGVDFKIKLLTVGE 291
           G      + +YDYSFKILLIGDSGVGKSSLLLSFISNSV D LSPTIGVDFKIK+LT+G 
Sbjct: 3   GSFSKGWNNSYDYSFKILLIGDSGVGKSSLLLSFISNSVRD-LSPTIGVDFKIKVLTLGG 61

Query: 292 KKLKLTIWDTAGQ 330
           K+LKLTIWDTAGQ
Sbjct: 62  KRLKLTIWDTAGQ 74


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