BLASTX nr result
ID: Cimicifuga21_contig00032426
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00032426
(435 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI26296.3| unnamed protein product [Vitis vinifera] 185 3e-45
ref|XP_002279192.1| PREDICTED: leucine-rich repeat extensin-like... 185 3e-45
ref|XP_002885524.1| hypothetical protein ARALYDRAFT_898761 [Arab... 171 4e-41
gb|ACU18125.1| unknown [Glycine max] 171 4e-41
ref|NP_188919.1| leucine-rich repeat extensin-like protein 6 [Ar... 170 1e-40
>emb|CBI26296.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 185 bits (470), Expect = 3e-45
Identities = 87/118 (73%), Positives = 103/118 (87%)
Frame = -1
Query: 435 GCLPPEIGLLKNLTVFDVSFNKLVGSLPESIEDMKSLEQLNVANNQLSDDIPESICSLPS 256
GCL PEIGLLKN+TVFDVS N+LVG LPE+I +MKSLEQLNVA+N+LS +IPE+ICSLP+
Sbjct: 298 GCLSPEIGLLKNVTVFDVSSNELVGPLPETIGEMKSLEQLNVAHNKLSGEIPETICSLPN 357
Query: 255 LENFTYSNNYFSGEPQSCLKLPDMDDKKNCIDDRPLQRSEKECASVLSHPVNCEAFGC 82
LENFTYS NYF GEP +CLKLP DD+KNCI DRP+QRS +ECA+ L+ PV+C AFGC
Sbjct: 358 LENFTYSYNYFCGEPPTCLKLPANDDQKNCIPDRPMQRSPEECAAFLAQPVDCGAFGC 415
>ref|XP_002279192.1| PREDICTED: leucine-rich repeat extensin-like protein 6-like [Vitis
vinifera]
Length = 394
Score = 185 bits (470), Expect = 3e-45
Identities = 87/118 (73%), Positives = 103/118 (87%)
Frame = -1
Query: 435 GCLPPEIGLLKNLTVFDVSFNKLVGSLPESIEDMKSLEQLNVANNQLSDDIPESICSLPS 256
GCL PEIGLLKN+TVFDVS N+LVG LPE+I +MKSLEQLNVA+N+LS +IPE+ICSLP+
Sbjct: 248 GCLSPEIGLLKNVTVFDVSSNELVGPLPETIGEMKSLEQLNVAHNKLSGEIPETICSLPN 307
Query: 255 LENFTYSNNYFSGEPQSCLKLPDMDDKKNCIDDRPLQRSEKECASVLSHPVNCEAFGC 82
LENFTYS NYF GEP +CLKLP DD+KNCI DRP+QRS +ECA+ L+ PV+C AFGC
Sbjct: 308 LENFTYSYNYFCGEPPTCLKLPANDDQKNCIPDRPMQRSPEECAAFLAQPVDCGAFGC 365
Score = 58.9 bits (141), Expect = 4e-07
Identities = 26/74 (35%), Positives = 44/74 (59%)
Frame = -1
Query: 435 GCLPPEIGLLKNLTVFDVSFNKLVGSLPESIEDMKSLEQLNVANNQLSDDIPESICSLPS 256
G LP E+GLL +L +F ++ N+ G+LP+S ++ L +L+++NN+ P + LPS
Sbjct: 105 GSLPEELGLLTDLALFHINSNRFCGTLPDSFRHLRLLYELDISNNRFKGQFPSVVLCLPS 164
Query: 255 LENFTYSNNYFSGE 214
L+ N F G+
Sbjct: 165 LKFLDIRYNEFEGD 178
>ref|XP_002885524.1| hypothetical protein ARALYDRAFT_898761 [Arabidopsis lyrata subsp.
lyrata] gi|297331364|gb|EFH61783.1| hypothetical protein
ARALYDRAFT_898761 [Arabidopsis lyrata subsp. lyrata]
Length = 441
Score = 171 bits (434), Expect = 4e-41
Identities = 79/119 (66%), Positives = 97/119 (81%)
Frame = -1
Query: 435 GCLPPEIGLLKNLTVFDVSFNKLVGSLPESIEDMKSLEQLNVANNQLSDDIPESICSLPS 256
GCL EIG+L LTVFDVS+N LVGSLPE+I DMKSLEQLN+A+N+ S IPESIC LPS
Sbjct: 309 GCLNREIGMLNQLTVFDVSYNNLVGSLPETIGDMKSLEQLNIAHNKFSGYIPESICRLPS 368
Query: 255 LENFTYSNNYFSGEPQSCLKLPDMDDKKNCIDDRPLQRSEKECASVLSHPVNCEAFGCS 79
LENFTYS N+FSGEP +CL+L + DD++NC+ RP+QRS EC S S+P++C +FGCS
Sbjct: 369 LENFTYSYNFFSGEPPACLRLQEFDDRRNCLPSRPMQRSLAECKSFSSYPIDCASFGCS 427
Score = 62.0 bits (149), Expect = 5e-08
Identities = 30/74 (40%), Positives = 49/74 (66%)
Frame = -1
Query: 435 GCLPPEIGLLKNLTVFDVSFNKLVGSLPESIEDMKSLEQLNVANNQLSDDIPESICSLPS 256
G LP E+GLL +L +F ++ N+ G LP++++ ++ L +L+V+NN+LS + P I SLPS
Sbjct: 165 GYLPIELGLLTDLALFHINSNRFQGQLPKTLKCLELLHELDVSNNKLSGEFPSVIFSLPS 224
Query: 255 LENFTYSNNYFSGE 214
L+ N F G+
Sbjct: 225 LKFLDIRFNEFQGD 238
>gb|ACU18125.1| unknown [Glycine max]
Length = 390
Score = 171 bits (434), Expect = 4e-41
Identities = 83/120 (69%), Positives = 93/120 (77%)
Frame = -1
Query: 435 GCLPPEIGLLKNLTVFDVSFNKLVGSLPESIEDMKSLEQLNVANNQLSDDIPESICSLPS 256
GCLP EIG L +TVFDVSFNKLVG LPES+ MK LEQLNVANN+LS +IPES+C LP
Sbjct: 250 GCLPSEIGDLDMVTVFDVSFNKLVGELPESLGRMKKLEQLNVANNELSGEIPESVCMLPR 309
Query: 255 LENFTYSNNYFSGEPQSCLKLPDMDDKKNCIDDRPLQRSEKECASVLSHPVNCEAFGCSS 76
LENFTYS NYF E +CLKL D DD KNCI RPLQRS EC + +HPV+C AFGC+S
Sbjct: 310 LENFTYSYNYFCSESPTCLKLKDKDDTKNCIPYRPLQRSLDECKAFYAHPVHCSAFGCAS 369
Score = 59.7 bits (143), Expect = 2e-07
Identities = 29/79 (36%), Positives = 46/79 (58%)
Frame = -1
Query: 435 GCLPPEIGLLKNLTVFDVSFNKLVGSLPESIEDMKSLEQLNVANNQLSDDIPESICSLPS 256
G LP E+GLL +L++ ++ N+ GSLP S + + L +L+++NNQ S PE + +P+
Sbjct: 107 GSLPEELGLLTDLSLLHINSNRFCGSLPTSFDKLHLLHELDISNNQFSGPFPEVVLCIPN 166
Query: 255 LENFTYSNNYFSGEPQSCL 199
L+ N F G S L
Sbjct: 167 LKYLDIRFNNFHGNVPSRL 185
>ref|NP_188919.1| leucine-rich repeat extensin-like protein 6 [Arabidopsis thaliana]
gi|75335502|sp|Q9LUI1.1|LRX6_ARATH RecName:
Full=Leucine-rich repeat extensin-like protein 6;
Short=AtLRX6; Short=LRR/EXTENSIN6; AltName: Full=Cell
wall hydroxyproline-rich glycoprotein; Flags: Precursor
gi|9279698|dbj|BAB01255.1| extensin protein-like
[Arabidopsis thaliana] gi|219291096|gb|ACL13984.1|
At3g22800 [Arabidopsis thaliana]
gi|332643157|gb|AEE76678.1| leucine-rich repeat
extensin-like protein 6 [Arabidopsis thaliana]
Length = 470
Score = 170 bits (431), Expect = 1e-40
Identities = 79/119 (66%), Positives = 96/119 (80%)
Frame = -1
Query: 435 GCLPPEIGLLKNLTVFDVSFNKLVGSLPESIEDMKSLEQLNVANNQLSDDIPESICSLPS 256
GCL EIGLL LTVFDVS+N LVGSLPE+I DMKSLEQLN+A+N+ S IPESIC LP
Sbjct: 257 GCLNREIGLLNQLTVFDVSYNNLVGSLPETIGDMKSLEQLNIAHNKFSGYIPESICRLPR 316
Query: 255 LENFTYSNNYFSGEPQSCLKLPDMDDKKNCIDDRPLQRSEKECASVLSHPVNCEAFGCS 79
LENFTYS N+FSGEP +CL+L + DD++NC+ RP+QRS EC S S+P++C +FGCS
Sbjct: 317 LENFTYSYNFFSGEPPACLRLQEFDDRRNCLPSRPMQRSLAECKSFSSYPIDCASFGCS 375
Score = 62.0 bits (149), Expect = 5e-08
Identities = 32/79 (40%), Positives = 50/79 (63%)
Frame = -1
Query: 435 GCLPPEIGLLKNLTVFDVSFNKLVGSLPESIEDMKSLEQLNVANNQLSDDIPESICSLPS 256
G LP E+GLL +L +F ++ N+ G LP++++ + L +L+V+NN+LS + P I SLPS
Sbjct: 113 GYLPLELGLLTDLALFHINSNRFQGQLPKTLKCLHLLHELDVSNNKLSGEFPSVIFSLPS 172
Query: 255 LENFTYSNNYFSGEPQSCL 199
L+ N F G+ S L
Sbjct: 173 LKFLDIRFNEFQGDVPSQL 191