BLASTX nr result

ID: Cimicifuga21_contig00032413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032413
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17696.3| unnamed protein product [Vitis vinifera]               81   1e-13
ref|XP_002270991.1| PREDICTED: UPF0392 protein RCOM_0530710-like...    81   1e-13
ref|XP_003555151.1| PREDICTED: UPF0392 protein RCOM_0530710-like...    80   2e-13
ref|XP_002526929.1| conserved hypothetical protein [Ricinus comm...    75   7e-12
ref|XP_002300081.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11

>emb|CBI17696.3| unnamed protein product [Vitis vinifera]
          Length = 1019

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/79 (54%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
 Frame = -3

Query: 331 LFTPRFRSVAAMAGWDXXXXXXXXXXXEDTPDRESRHKKRVNSHFKSPPTSSRRIKRVQR 152
           +F+PRF+SVAA+AGWD           EDTPDR  +HKKR +  FK+PP++SRR +R QR
Sbjct: 642 VFSPRFKSVAALAGWDEEALLIASLVVEDTPDRLVKHKKRSDLTFKTPPSNSRRKRRTQR 701

Query: 151 RQ-ASIPMVVLDLENEEIA 98
           R  ASIP+ VLDL+  E A
Sbjct: 702 RSPASIPVTVLDLDEGENA 720


>ref|XP_002270991.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Vitis vinifera]
          Length = 908

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/79 (54%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
 Frame = -3

Query: 331 LFTPRFRSVAAMAGWDXXXXXXXXXXXEDTPDRESRHKKRVNSHFKSPPTSSRRIKRVQR 152
           +F+PRF+SVAA+AGWD           EDTPDR  +HKKR +  FK+PP++SRR +R QR
Sbjct: 596 VFSPRFKSVAALAGWDEEALLIASLVVEDTPDRLVKHKKRSDLTFKTPPSNSRRKRRTQR 655

Query: 151 RQ-ASIPMVVLDLENEEIA 98
           R  ASIP+ VLDL+  E A
Sbjct: 656 RSPASIPVTVLDLDEGENA 674


>ref|XP_003555151.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Glycine max]
          Length = 937

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 45/86 (52%), Positives = 56/86 (65%), Gaps = 4/86 (4%)
 Frame = -3

Query: 349 SDENG----TLFTPRFRSVAAMAGWDXXXXXXXXXXXEDTPDRESRHKKRVNSHFKSPPT 182
           +D NG    TLF+PRF+S AAMAGWD           EDTPDR+ +HKKR   H K+PP 
Sbjct: 577 TDYNGQNLATLFSPRFKSAAAMAGWDEEALLLASLFVEDTPDRDPKHKKRYVWHSKTPPN 636

Query: 181 SSRRIKRVQRRQASIPMVVLDLENEE 104
           SSR+ + ++  QA IP VVLDL+ EE
Sbjct: 637 SSRKRRALRSPQAPIP-VVLDLDAEE 661


>ref|XP_002526929.1| conserved hypothetical protein [Ricinus communis]
           gi|223533681|gb|EEF35416.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 400

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
 Frame = -3

Query: 364 LKPSISDENG----TLFTPRFRSVAAMAGWDXXXXXXXXXXXEDTPDRESRHKKRVNSHF 197
           L P  + ENG     +F+PRF+S+AAMAGWD           EDTPDR  +HKKR + HF
Sbjct: 14  LDPKNTVENGQNMDNMFSPRFKSLAAMAGWDEESILTASLIVEDTPDRLFKHKKRSDLHF 73

Query: 196 KSPPT-SSRRIKRVQRRQASIPMVVLDLENE 107
           ++PP+ SSRR +R      S+P++ LD E E
Sbjct: 74  QTPPSNSSRRAQRKSPVSVSVPVINLDEEEE 104


>ref|XP_002300081.1| predicted protein [Populus trichocarpa] gi|222847339|gb|EEE84886.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/76 (47%), Positives = 52/76 (68%)
 Frame = -3

Query: 331 LFTPRFRSVAAMAGWDXXXXXXXXXXXEDTPDRESRHKKRVNSHFKSPPTSSRRIKRVQR 152
           LF+PRF+SVAAMAGWD           EDTP+R+  HKKR + HFK+PP+++ R +  ++
Sbjct: 601 LFSPRFKSVAAMAGWDEESILFASLIVEDTPERQFEHKKRSDLHFKTPPSTNTR-RDQKK 659

Query: 151 RQASIPMVVLDLENEE 104
              SIP+ +L+L+ EE
Sbjct: 660 SPISIPVPILNLDEEE 675


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