BLASTX nr result

ID: Cimicifuga21_contig00032404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032404
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528523.1| conserved hypothetical protein [Ricinus comm...    91   8e-17
ref|XP_002334939.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002317632.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_003631927.1| PREDICTED: uncharacterized protein LOC100854...    65   6e-09
ref|XP_003629053.1| hypothetical protein MTR_8g072610 [Medicago ...    64   1e-08

>ref|XP_002528523.1| conserved hypothetical protein [Ricinus communis]
           gi|223532025|gb|EEF33835.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 127

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 53/101 (52%), Positives = 64/101 (63%), Gaps = 2/101 (1%)
 Frame = -1

Query: 513 YKRVRGRGFKMNHRRFSVYRLRARFLHLIKLLSRWSWKSSCGQAXXXXXXXXXXXXXXSP 334
           Y    GRGF++N +RFSV RLRARF++L KLLSRW  KSS G A                
Sbjct: 16  YHGYGGRGFRLNCKRFSVQRLRARFVYLFKLLSRW--KSSYGHAVQSLKRSMSRSSGIKR 73

Query: 333 ATS--QGAYYEGQTEYRLRSYGRSNSFYSEAIADCLEFIKR 217
            TS  +    E  ++ R+R++GRSNSFYSEAIADCLEFIKR
Sbjct: 74  NTSSRRSLVVEVSSDCRMRTFGRSNSFYSEAIADCLEFIKR 114


>ref|XP_002334939.1| predicted protein [Populus trichocarpa] gi|222832473|gb|EEE70950.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 50/105 (47%), Positives = 57/105 (54%), Gaps = 12/105 (11%)
 Frame = -1

Query: 495 RGFKMNH-RRFSVYRLRARFLHLIKLLSRWSWKSSCGQAXXXXXXXXXXXXXXS------ 337
           RGF++ + RRFSV R RARF  L + LSRW  +SS GQA                     
Sbjct: 29  RGFRLKYPRRFSVQRFRARFFCLFRFLSRW--RSSYGQAVQYLKRGMGRDSGIKRCGSSK 86

Query: 336 -----PATSQGAYYEGQTEYRLRSYGRSNSFYSEAIADCLEFIKR 217
                 ATS     +G   Y  RS+GRSNSFYSEAIADCLEFIKR
Sbjct: 87  RVLVMDATSCHYMEKGDEHYSCRSFGRSNSFYSEAIADCLEFIKR 131


>ref|XP_002317632.1| predicted protein [Populus trichocarpa] gi|222860697|gb|EEE98244.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 50/127 (39%), Positives = 59/127 (46%), Gaps = 24/127 (18%)
 Frame = -1

Query: 525 SHMSYKRVRGR-----------GFKMNH-RRFSVYRLRARFLHLIKLLSRWSWKSSCGQA 382
           SHM Y RV  R           GF++ + RRFSV RLRAR            W+SS G+A
Sbjct: 2   SHMRYTRVGKRSHHRHGASCTRGFRLKYPRRFSVQRLRAR------------WRSSYGRA 49

Query: 381 XXXXXXXXXXXXXXSPATSQG----------AYYEGQTE--YRLRSYGRSNSFYSEAIAD 238
                                           +Y G+ +  YR RS+GRSNSFYSEAIAD
Sbjct: 50  VQYLKRGVNRNSSIIERCGSNERGFMMDATSCHYMGKVDDQYRFRSFGRSNSFYSEAIAD 109

Query: 237 CLEFIKR 217
           CLEFIKR
Sbjct: 110 CLEFIKR 116


>ref|XP_003631927.1| PREDICTED: uncharacterized protein LOC100854263 [Vitis vinifera]
          Length = 125

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 45/110 (40%), Positives = 58/110 (52%), Gaps = 11/110 (10%)
 Frame = -1

Query: 513 YKRVR------GRGFKMNHRRFSVY-RLRARFLHLIKLLSRWSWKSSCGQAXXXXXXXXX 355
           YKRV       GRGF++N +RFSV  R+R R ++L +L         CGQA         
Sbjct: 8   YKRVGRRSWHGGRGFRLNPKRFSVLIRVRVRLMYLFRL---------CGQAVESLKRGIS 58

Query: 354 XXXXXSPAT----SQGAYYEGQTEYRLRSYGRSNSFYSEAIADCLEFIKR 217
                   +    S+ +      + R RS+GR+NSFYSEAIADCLEFIKR
Sbjct: 59  RSRSTKKGSDSSRSRMSLMMESGDCRFRSFGRTNSFYSEAIADCLEFIKR 108


>ref|XP_003629053.1| hypothetical protein MTR_8g072610 [Medicago truncatula]
           gi|355523075|gb|AET03529.1| hypothetical protein
           MTR_8g072610 [Medicago truncatula]
          Length = 125

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 46/113 (40%), Positives = 60/113 (53%), Gaps = 11/113 (9%)
 Frame = -1

Query: 522 HMSYKRVRG---RGFKMNHRRFSVYRLRARFLHLIKLLSRWSWKSSCGQAXXXXXXXXXX 352
           HMSY RV     +GF++N R+F V RLR RF   ++L +  + K S G A          
Sbjct: 3   HMSYNRVSNGSNKGFRLNPRKFYVLRLRKRFNFFLRLFN--NLKLSYGDALQMLKKVFCR 60

Query: 351 XXXXSPATS------QGAYYEGQTEY-RLRS-YGRSNSFYSEAIADCLEFIKR 217
                   S      +    +G  +Y ++RS YGRSNSFY+EAI DCLEFIKR
Sbjct: 61  KIGFKRNNSSRRSLVRDEEVKGHDDYWKMRSSYGRSNSFYAEAIEDCLEFIKR 113


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