BLASTX nr result

ID: Cimicifuga21_contig00032403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032403
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containi...    75   6e-12
gb|ACZ98537.1| PPR motif protein [Malus x domestica]                   75   8e-12
gb|ABR17838.1| unknown [Picea sitchensis]                              73   4e-11
emb|CBI30094.3| unnamed protein product [Vitis vinifera]               72   7e-11
ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containi...    72   7e-11

>ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Glycine max]
          Length = 805

 Score = 75.5 bits (184), Expect = 6e-12
 Identities = 36/58 (62%), Positives = 45/58 (77%)
 Frame = +2

Query: 2   WEDVHKLRVVMKEKGLKKSPGCSEIQIGTELHVFVAWDRSHAQSELIYETLALLEWEM 175
           W+ V  LR +MKEKGL+K PGCS I++G ELHVF+A DRSH ++E IY TL LL +EM
Sbjct: 747 WDKVSNLRGLMKEKGLRKIPGCSWIEVGQELHVFIASDRSHPKTEEIYVTLDLLGFEM 804


>gb|ACZ98537.1| PPR motif protein [Malus x domestica]
          Length = 751

 Score = 75.1 bits (183), Expect = 8e-12
 Identities = 35/58 (60%), Positives = 47/58 (81%)
 Frame = +2

Query: 2   WEDVHKLRVVMKEKGLKKSPGCSEIQIGTELHVFVAWDRSHAQSELIYETLALLEWEM 175
           W++V K+R +MKE+GL+K PGCS IQ+G EL+VFVA D+SH ++E IY TLALL  E+
Sbjct: 691 WDEVKKVRQLMKERGLRKIPGCSWIQVGEELNVFVAGDKSHPETEEIYTTLALLLMEI 748


>gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 34/68 (50%), Positives = 45/68 (66%)
 Frame = +2

Query: 2   WEDVHKLRVVMKEKGLKKSPGCSEIQIGTELHVFVAWDRSHAQSELIYETLALLEWEMRS 181
           WEDV KLR +MKEKG+KK PGCS + +  ++  F+  DR+H QSE IY  L +L  +MR 
Sbjct: 642 WEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEILYEQMRK 701

Query: 182 SNYVHMLN 205
           + YV   N
Sbjct: 702 AGYVPNTN 709


>emb|CBI30094.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score = 72.0 bits (175), Expect = 7e-11
 Identities = 31/63 (49%), Positives = 45/63 (71%)
 Frame = +2

Query: 2   WEDVHKLRVVMKEKGLKKSPGCSEIQIGTELHVFVAWDRSHAQSELIYETLALLEWEMRS 181
           W +  ++R+ MK+KGLKK PGCS I++G  +HVFV  D+SH+QS+LIY  L  L  +M+ 
Sbjct: 537 WREAARVRLKMKDKGLKKQPGCSWIEVGNRVHVFVVGDKSHSQSKLIYSLLRDLHSKMKK 596

Query: 182 SNY 190
           + Y
Sbjct: 597 AGY 599


>ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Vitis vinifera]
          Length = 635

 Score = 72.0 bits (175), Expect = 7e-11
 Identities = 31/63 (49%), Positives = 45/63 (71%)
 Frame = +2

Query: 2   WEDVHKLRVVMKEKGLKKSPGCSEIQIGTELHVFVAWDRSHAQSELIYETLALLEWEMRS 181
           W +  ++R+ MK+KGLKK PGCS I++G  +HVFV  D+SH+QS+LIY  L  L  +M+ 
Sbjct: 558 WREAARVRLKMKDKGLKKQPGCSWIEVGNRVHVFVVGDKSHSQSKLIYSLLRDLHSKMKK 617

Query: 182 SNY 190
           + Y
Sbjct: 618 AGY 620


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