BLASTX nr result
ID: Cimicifuga21_contig00032387
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00032387 (274 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004161743.1| PREDICTED: LOW QUALITY PROTEIN: rhamnogalact... 75 7e-12 ref|XP_004136251.1| PREDICTED: rhamnogalacturonate lyase B-like ... 75 7e-12 ref|XP_002527358.1| lyase, putative [Ricinus communis] gi|223533... 74 9e-12 ref|XP_002301115.1| predicted protein [Populus trichocarpa] gi|2... 73 3e-11 ref|XP_002301113.1| predicted protein [Populus trichocarpa] gi|2... 72 4e-11 >ref|XP_004161743.1| PREDICTED: LOW QUALITY PROTEIN: rhamnogalacturonate lyase B-like [Cucumis sativus] Length = 635 Score = 74.7 bits (182), Expect = 7e-12 Identities = 38/68 (55%), Positives = 42/68 (61%), Gaps = 21/68 (30%) Frame = +3 Query: 3 LYASVPGFIGDYK---------------------SPRSGPTLWEIGYPDRSAAEFFIPDP 119 LYA VPGFIGDY+ PR+GPTLWEIG PDRSAAEF+IPDP Sbjct: 400 LYAWVPGFIGDYRYDVLINVSSGSDMDVGDLVYEPPRNGPTLWEIGIPDRSAAEFYIPDP 459 Query: 120 DSRYINPL 143 D +YIN L Sbjct: 460 DPKYINKL 467 >ref|XP_004136251.1| PREDICTED: rhamnogalacturonate lyase B-like [Cucumis sativus] Length = 642 Score = 74.7 bits (182), Expect = 7e-12 Identities = 38/68 (55%), Positives = 42/68 (61%), Gaps = 21/68 (30%) Frame = +3 Query: 3 LYASVPGFIGDYK---------------------SPRSGPTLWEIGYPDRSAAEFFIPDP 119 LYA VPGFIGDY+ PR+GPTLWEIG PDRSAAEF+IPDP Sbjct: 400 LYAWVPGFIGDYRYDVLINVSSGSDMDVGDLVYEPPRNGPTLWEIGIPDRSAAEFYIPDP 459 Query: 120 DSRYINPL 143 D +YIN L Sbjct: 460 DPKYINKL 467 >ref|XP_002527358.1| lyase, putative [Ricinus communis] gi|223533277|gb|EEF35030.1| lyase, putative [Ricinus communis] Length = 646 Score = 74.3 bits (181), Expect = 9e-12 Identities = 37/68 (54%), Positives = 42/68 (61%), Gaps = 21/68 (30%) Frame = +3 Query: 3 LYASVPGFIGDYK---------------------SPRSGPTLWEIGYPDRSAAEFFIPDP 119 LYA VPGFIGDY+ PR+GPTLWEIG PDRSAAEF++PDP Sbjct: 411 LYAWVPGFIGDYRYDTVVTITEGCYIDLGDVVYEPPRNGPTLWEIGIPDRSAAEFYVPDP 470 Query: 120 DSRYINPL 143 D +YIN L Sbjct: 471 DPKYINKL 478 >ref|XP_002301115.1| predicted protein [Populus trichocarpa] gi|222842841|gb|EEE80388.1| predicted protein [Populus trichocarpa] Length = 731 Score = 72.8 bits (177), Expect = 3e-11 Identities = 36/68 (52%), Positives = 41/68 (60%), Gaps = 21/68 (30%) Frame = +3 Query: 3 LYASVPGFIGDY---------------------KSPRSGPTLWEIGYPDRSAAEFFIPDP 119 LYA +PGFIGDY K PR GPTLWEIG P+RSAAEF++PDP Sbjct: 495 LYAWIPGFIGDYRNDEVITITPGCDLDLGDVIYKPPRDGPTLWEIGIPNRSAAEFYVPDP 554 Query: 120 DSRYINPL 143 D +YIN L Sbjct: 555 DPKYINEL 562 >ref|XP_002301113.1| predicted protein [Populus trichocarpa] gi|222842839|gb|EEE80386.1| predicted protein [Populus trichocarpa] Length = 683 Score = 72.4 bits (176), Expect = 4e-11 Identities = 38/72 (52%), Positives = 44/72 (61%), Gaps = 21/72 (29%) Frame = +3 Query: 3 LYASVPGFIGDYK---------------------SPRSGPTLWEIGYPDRSAAEFFIPDP 119 LYA VPGFIGDYK +PR+G TLWEIG+PDRSAAEF+IPD Sbjct: 447 LYAWVPGFIGDYKFTSVININSGSNIDIGDLVYEAPRNGSTLWEIGFPDRSAAEFYIPDA 506 Query: 120 DSRYINPLKSKQ 155 + +YIN L KQ Sbjct: 507 NPKYINKLYLKQ 518