BLASTX nr result

ID: Cimicifuga21_contig00032387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032387
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161743.1| PREDICTED: LOW QUALITY PROTEIN: rhamnogalact...    75   7e-12
ref|XP_004136251.1| PREDICTED: rhamnogalacturonate lyase B-like ...    75   7e-12
ref|XP_002527358.1| lyase, putative [Ricinus communis] gi|223533...    74   9e-12
ref|XP_002301115.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11
ref|XP_002301113.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11

>ref|XP_004161743.1| PREDICTED: LOW QUALITY PROTEIN: rhamnogalacturonate lyase B-like
           [Cucumis sativus]
          Length = 635

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/68 (55%), Positives = 42/68 (61%), Gaps = 21/68 (30%)
 Frame = +3

Query: 3   LYASVPGFIGDYK---------------------SPRSGPTLWEIGYPDRSAAEFFIPDP 119
           LYA VPGFIGDY+                      PR+GPTLWEIG PDRSAAEF+IPDP
Sbjct: 400 LYAWVPGFIGDYRYDVLINVSSGSDMDVGDLVYEPPRNGPTLWEIGIPDRSAAEFYIPDP 459

Query: 120 DSRYINPL 143
           D +YIN L
Sbjct: 460 DPKYINKL 467


>ref|XP_004136251.1| PREDICTED: rhamnogalacturonate lyase B-like [Cucumis sativus]
          Length = 642

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/68 (55%), Positives = 42/68 (61%), Gaps = 21/68 (30%)
 Frame = +3

Query: 3   LYASVPGFIGDYK---------------------SPRSGPTLWEIGYPDRSAAEFFIPDP 119
           LYA VPGFIGDY+                      PR+GPTLWEIG PDRSAAEF+IPDP
Sbjct: 400 LYAWVPGFIGDYRYDVLINVSSGSDMDVGDLVYEPPRNGPTLWEIGIPDRSAAEFYIPDP 459

Query: 120 DSRYINPL 143
           D +YIN L
Sbjct: 460 DPKYINKL 467


>ref|XP_002527358.1| lyase, putative [Ricinus communis] gi|223533277|gb|EEF35030.1|
           lyase, putative [Ricinus communis]
          Length = 646

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 37/68 (54%), Positives = 42/68 (61%), Gaps = 21/68 (30%)
 Frame = +3

Query: 3   LYASVPGFIGDYK---------------------SPRSGPTLWEIGYPDRSAAEFFIPDP 119
           LYA VPGFIGDY+                      PR+GPTLWEIG PDRSAAEF++PDP
Sbjct: 411 LYAWVPGFIGDYRYDTVVTITEGCYIDLGDVVYEPPRNGPTLWEIGIPDRSAAEFYVPDP 470

Query: 120 DSRYINPL 143
           D +YIN L
Sbjct: 471 DPKYINKL 478


>ref|XP_002301115.1| predicted protein [Populus trichocarpa] gi|222842841|gb|EEE80388.1|
           predicted protein [Populus trichocarpa]
          Length = 731

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/68 (52%), Positives = 41/68 (60%), Gaps = 21/68 (30%)
 Frame = +3

Query: 3   LYASVPGFIGDY---------------------KSPRSGPTLWEIGYPDRSAAEFFIPDP 119
           LYA +PGFIGDY                     K PR GPTLWEIG P+RSAAEF++PDP
Sbjct: 495 LYAWIPGFIGDYRNDEVITITPGCDLDLGDVIYKPPRDGPTLWEIGIPNRSAAEFYVPDP 554

Query: 120 DSRYINPL 143
           D +YIN L
Sbjct: 555 DPKYINEL 562


>ref|XP_002301113.1| predicted protein [Populus trichocarpa] gi|222842839|gb|EEE80386.1|
           predicted protein [Populus trichocarpa]
          Length = 683

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/72 (52%), Positives = 44/72 (61%), Gaps = 21/72 (29%)
 Frame = +3

Query: 3   LYASVPGFIGDYK---------------------SPRSGPTLWEIGYPDRSAAEFFIPDP 119
           LYA VPGFIGDYK                     +PR+G TLWEIG+PDRSAAEF+IPD 
Sbjct: 447 LYAWVPGFIGDYKFTSVININSGSNIDIGDLVYEAPRNGSTLWEIGFPDRSAAEFYIPDA 506

Query: 120 DSRYINPLKSKQ 155
           + +YIN L  KQ
Sbjct: 507 NPKYINKLYLKQ 518


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