BLASTX nr result

ID: Cimicifuga21_contig00032368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032368
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274737.1| PREDICTED: UPF0420 protein-like [Vitis vinif...   152   4e-35
emb|CBI30394.3| unnamed protein product [Vitis vinifera]              143   2e-32
ref|XP_002528102.1| conserved hypothetical protein [Ricinus comm...   137   2e-30
ref|XP_003530281.1| PREDICTED: UPF0420 protein-like [Glycine max]     129   4e-28
ref|XP_002309136.1| predicted protein [Populus trichocarpa] gi|2...   128   7e-28

>ref|XP_002274737.1| PREDICTED: UPF0420 protein-like [Vitis vinifera]
          Length = 503

 Score =  152 bits (384), Expect = 4e-35
 Identities = 81/159 (50%), Positives = 109/159 (68%), Gaps = 6/159 (3%)
 Frame = -3

Query: 530 MVFSLQLSLPLFA----LKCSRKRCFDYXXXXXXXXXXXQDEGENKNNANRLQGQKP-HV 366
           MV +LQ S P+      LK  R++  D+            +EG+   +A   +GQ P HV
Sbjct: 1   MVHALQFSFPVSGFQTPLKIRRRKFGDFGIVCSSTLSDSPEEGQEIGDAGNKRGQCPQHV 60

Query: 365 VLVERYSNGTAK-RYVLDGELPVKTFVDEKGPAVNGASRATDYSNTELLWLPDGFKEFIL 189
           +L+E+Y+NGTAK R++LD ++ ++TF++E+G       + + +S+T+L WLP   K+FIL
Sbjct: 61  ILLEKYNNGTAKSRFILDDDIQIQTFLEEEGSKTERV-QGSSFSDTQLSWLPIIVKDFIL 119

Query: 188 PAGFPGSVSDDYLEYMLLQFPTNVTAWICHALVTSSLLK 72
           PAGFPGSVSDDYLEYMLLQFPTNVTAWICH LVTSSLLK
Sbjct: 120 PAGFPGSVSDDYLEYMLLQFPTNVTAWICHTLVTSSLLK 158


>emb|CBI30394.3| unnamed protein product [Vitis vinifera]
          Length = 462

 Score =  143 bits (360), Expect = 2e-32
 Identities = 68/106 (64%), Positives = 88/106 (83%), Gaps = 1/106 (0%)
 Frame = -3

Query: 386 QGQKP-HVVLVERYSNGTAKRYVLDGELPVKTFVDEKGPAVNGASRATDYSNTELLWLPD 210
           +GQ P HV+L+E+Y+NGTAKR++LD ++ ++TF++E+G       + + +S+T+L WLP 
Sbjct: 16  RGQCPQHVILLEKYNNGTAKRFILDDDIQIQTFLEEEGSKTERV-QGSSFSDTQLSWLPI 74

Query: 209 GFKEFILPAGFPGSVSDDYLEYMLLQFPTNVTAWICHALVTSSLLK 72
             K+FILPAGFPGSVSDDYLEYMLLQFPTNVTAWICH LVTSSLLK
Sbjct: 75  IVKDFILPAGFPGSVSDDYLEYMLLQFPTNVTAWICHTLVTSSLLK 120


>ref|XP_002528102.1| conserved hypothetical protein [Ricinus communis]
           gi|223532491|gb|EEF34281.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 485

 Score =  137 bits (344), Expect = 2e-30
 Identities = 78/153 (50%), Positives = 96/153 (62%)
 Frame = -3

Query: 530 MVFSLQLSLPLFALKCSRKRCFDYXXXXXXXXXXXQDEGENKNNANRLQGQKPHVVLVER 351
           M FSL+LS P  A +   +R               +DE  N  N          V+LVER
Sbjct: 1   MSFSLRLSSPAPAFESCNRRKRARPLQILSCFQAGKDETNNCRN----------VILVER 50

Query: 350 YSNGTAKRYVLDGELPVKTFVDEKGPAVNGASRATDYSNTELLWLPDGFKEFILPAGFPG 171
           Y+NGT++RYVLD +  +K F++E+G A N A + +  S+  L WLP   K+FILPAGFPG
Sbjct: 51  YANGTSRRYVLDDDAQLKPFLEEQG-AKNSALQESYSSDINLSWLPYIIKDFILPAGFPG 109

Query: 170 SVSDDYLEYMLLQFPTNVTAWICHALVTSSLLK 72
           SVSDDY +YMLLQFPTNVT WICH LVTSSLLK
Sbjct: 110 SVSDDYFQYMLLQFPTNVTGWICHTLVTSSLLK 142


>ref|XP_003530281.1| PREDICTED: UPF0420 protein-like [Glycine max]
          Length = 480

 Score =  129 bits (323), Expect = 4e-28
 Identities = 65/115 (56%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
 Frame = -3

Query: 413 ENKNNANRLQGQ-KPHVVLVERYSNGTAKRYVLDGELPVKTFVDEKGPAVNGASRATDYS 237
           ++++ A+   GQ    V+LVERYSNGTAKRYVL  +  ++ F+ E+  +     +    S
Sbjct: 24  KDEDGADNGGGQVSSRVILVERYSNGTAKRYVLGDDSQLQAFLVEEDRSTPNRFQDLHSS 83

Query: 236 NTELLWLPDGFKEFILPAGFPGSVSDDYLEYMLLQFPTNVTAWICHALVTSSLLK 72
           +  L WLP+  K+F+LPAGFPGSVSDDYL+YMLLQFPTNVT WICH LVTSSLLK
Sbjct: 84  DESLSWLPEIIKDFVLPAGFPGSVSDDYLDYMLLQFPTNVTGWICHTLVTSSLLK 138


>ref|XP_002309136.1| predicted protein [Populus trichocarpa] gi|222855112|gb|EEE92659.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score =  128 bits (321), Expect = 7e-28
 Identities = 63/105 (60%), Positives = 79/105 (75%), Gaps = 2/105 (1%)
 Frame = -3

Query: 380 QKP--HVVLVERYSNGTAKRYVLDGELPVKTFVDEKGPAVNGASRATDYSNTELLWLPDG 207
           +KP   V+L+ERY NGTAKRY LD  + ++ F+++ G + N +   +  S   L WLPD 
Sbjct: 43  EKPDNEVILLERYGNGTAKRYTLDDAVQLQGFLEKNG-SENRSFEESRLSEAGLSWLPDI 101

Query: 206 FKEFILPAGFPGSVSDDYLEYMLLQFPTNVTAWICHALVTSSLLK 72
            K+FILPAGFPGSVSDDYL+YM+LQFPTN+T WICH LVTSSLLK
Sbjct: 102 LKDFILPAGFPGSVSDDYLQYMVLQFPTNITGWICHTLVTSSLLK 146


Top