BLASTX nr result

ID: Cimicifuga21_contig00032353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032353
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25069.3| unnamed protein product [Vitis vinifera]               86   2e-15
ref|XP_002268443.2| PREDICTED: transcription factor bHLH25-like ...    86   2e-15
ref|XP_002528911.1| DNA binding protein, putative [Ricinus commu...    85   7e-15
ref|XP_002310318.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_002270448.2| PREDICTED: transcription factor bHLH25-like ...    83   3e-14

>emb|CBI25069.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/71 (61%), Positives = 58/71 (81%), Gaps = 1/71 (1%)
 Frame = -2

Query: 212 SVVFVKKVQVPLDDDSSSNEENFTNCS-GEPLPEVEARVSDRNVLIKIHCEKHKGVLVKT 36
           SVVFVKK QV LD D+SS++E+F+     EPLPE+EAR SD++VLI+IHCEK KGV+ K 
Sbjct: 233 SVVFVKKSQVFLDGDNSSSDEDFSGSPLDEPLPEIEARFSDKSVLIRIHCEKRKGVVEKL 292

Query: 35  LAEIENLNLSV 3
           +AE+E L+L+V
Sbjct: 293 VAEVEGLHLTV 303


>ref|XP_002268443.2| PREDICTED: transcription factor bHLH25-like [Vitis vinifera]
           gi|147839680|emb|CAN75020.1| hypothetical protein
           VITISV_039940 [Vitis vinifera]
          Length = 331

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/71 (61%), Positives = 58/71 (81%), Gaps = 1/71 (1%)
 Frame = -2

Query: 212 SVVFVKKVQVPLDDDSSSNEENFTNCS-GEPLPEVEARVSDRNVLIKIHCEKHKGVLVKT 36
           SVVFVKK QV LD D+SS++E+F+     EPLPE+EAR SD++VLI+IHCEK KGV+ K 
Sbjct: 220 SVVFVKKSQVFLDGDNSSSDEDFSGSPLDEPLPEIEARFSDKSVLIRIHCEKRKGVVEKL 279

Query: 35  LAEIENLNLSV 3
           +AE+E L+L+V
Sbjct: 280 VAEVEGLHLTV 290


>ref|XP_002528911.1| DNA binding protein, putative [Ricinus communis]
           gi|223531665|gb|EEF33491.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 331

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 38/70 (54%), Positives = 54/70 (77%)
 Frame = -2

Query: 212 SVVFVKKVQVPLDDDSSSNEENFTNCSGEPLPEVEARVSDRNVLIKIHCEKHKGVLVKTL 33
           S++ +KK Q+  DD+SSS ++N   CS   LPE+EARVSD++VL +IHCEK +GV+ K L
Sbjct: 218 SIILIKKSQLSADDESSSCDDNSDGCSDSALPEIEARVSDKDVLFRIHCEKQQGVVPKIL 277

Query: 32  AEIENLNLSV 3
            E+ENL+LS+
Sbjct: 278 HEVENLHLSI 287


>ref|XP_002310318.1| predicted protein [Populus trichocarpa] gi|222853221|gb|EEE90768.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 38/70 (54%), Positives = 56/70 (80%)
 Frame = -2

Query: 212 SVVFVKKVQVPLDDDSSSNEENFTNCSGEPLPEVEARVSDRNVLIKIHCEKHKGVLVKTL 33
           SVV +KK ++ +DD+ +S++ENF    G PLPE+EAR +D++VLI+IHC+  +GV +K L
Sbjct: 243 SVVLLKKSKLSVDDECTSSDENFDGLPGSPLPEIEARTTDKDVLIRIHCKNQQGVGIKIL 302

Query: 32  AEIENLNLSV 3
           +EIENL+LSV
Sbjct: 303 SEIENLHLSV 312


>ref|XP_002270448.2| PREDICTED: transcription factor bHLH25-like [Vitis vinifera]
          Length = 365

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 39/70 (55%), Positives = 53/70 (75%)
 Frame = -2

Query: 212 SVVFVKKVQVPLDDDSSSNEENFTNCSGEPLPEVEARVSDRNVLIKIHCEKHKGVLVKTL 33
           SVVF+KK Q+  DD++SS +ENF  C  + + ++EARVSD+NVLI+IHC+K KG + K L
Sbjct: 252 SVVFIKKSQLSADDETSSCDENFDGCREDAVRDIEARVSDKNVLIRIHCKKQKGFVAKVL 311

Query: 32  AEIENLNLSV 3
            EIE  +LSV
Sbjct: 312 GEIEEHHLSV 321


Top