BLASTX nr result

ID: Cimicifuga21_contig00032343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032343
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518959.1| Auxin-induced protein 5NG4, putative [Ricinu...    75   5e-12
ref|XP_002317651.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
emb|CBI34638.3| unnamed protein product [Vitis vinifera]               65   7e-09
ref|XP_002317650.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
ref|XP_002273800.2| PREDICTED: auxin-induced protein 5NG4-like [...    60   1e-07

>ref|XP_002518959.1| Auxin-induced protein 5NG4, putative [Ricinus communis]
           gi|223541946|gb|EEF43492.1| Auxin-induced protein 5NG4,
           putative [Ricinus communis]
          Length = 372

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 35/41 (85%), Positives = 38/41 (92%)
 Frame = -3

Query: 408 TCASYAAMIVVQLAYGGSNILIKIALEKGLNQLAFIAYRHL 286
           TC SYAAMI+VQLAYGGSNIL+KIALEKGLNQL F+ YRHL
Sbjct: 3   TCTSYAAMILVQLAYGGSNILMKIALEKGLNQLVFVVYRHL 43


>ref|XP_002317651.1| predicted protein [Populus trichocarpa] gi|222860716|gb|EEE98263.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 30/42 (71%), Positives = 37/42 (88%)
 Frame = -3

Query: 411 RTCASYAAMIVVQLAYGGSNILIKIALEKGLNQLAFIAYRHL 286
           + CA YAAM++VQ AYGGSNIL+KIALEKGLNQ+ F+ YRH+
Sbjct: 2   QACAPYAAMLLVQFAYGGSNILMKIALEKGLNQIVFVVYRHV 43


>emb|CBI34638.3| unnamed protein product [Vitis vinifera]
          Length = 365

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 30/52 (57%), Positives = 38/52 (73%), Gaps = 9/52 (17%)
 Frame = -3

Query: 396 YAAMIVVQLAYGGSNILIKIALEKGLNQLAFIAYRHL---------TYAFER 268
           Y AM+++QLAYGGSNILIKIA++KGLNQ+ F+ YRH+          Y FER
Sbjct: 7   YGAMVLIQLAYGGSNILIKIAIDKGLNQIVFVVYRHIIAMLLLGPFAYVFER 58


>ref|XP_002317650.1| predicted protein [Populus trichocarpa] gi|222860715|gb|EEE98262.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 30/46 (65%), Positives = 38/46 (82%)
 Frame = -3

Query: 411 RTCASYAAMIVVQLAYGGSNILIKIALEKGLNQLAFIAYRHLTYAF 274
           + CA YAAM++VQ AYGGSNIL+KIALEKGLNQ+ F+   H+TY +
Sbjct: 2   QACAPYAAMLLVQFAYGGSNILMKIALEKGLNQIVFV---HITYKY 44


>ref|XP_002273800.2| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]
          Length = 356

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/49 (57%), Positives = 36/49 (73%), Gaps = 9/49 (18%)
 Frame = -3

Query: 387 MIVVQLAYGGSNILIKIALEKGLNQLAFIAYRHL---------TYAFER 268
           M+++QLAYGGSNILIKIA++KGLNQ+ F+ YRH+          Y FER
Sbjct: 1   MVLIQLAYGGSNILIKIAIDKGLNQIVFVVYRHIIAMLLLGPFAYVFER 49


Top