BLASTX nr result

ID: Cimicifuga21_contig00032340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032340
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518797.1| conserved hypothetical protein [Ricinus comm...   146   1e-33
ref|XP_002327114.1| predicted protein [Populus trichocarpa] gi|2...   142   4e-32
ref|XP_002285039.1| PREDICTED: nodulation protein H [Vitis vinif...   138   5e-31
ref|XP_002313841.1| predicted protein [Populus trichocarpa] gi|2...   137   9e-31
ref|XP_002330322.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30

>ref|XP_002518797.1| conserved hypothetical protein [Ricinus communis]
           gi|223542178|gb|EEF43722.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 368

 Score =  146 bits (369), Expect = 1e-33
 Identities = 65/94 (69%), Positives = 76/94 (80%)
 Frame = -3

Query: 284 MAEDLCFFTKDTLIIKAPKKSPLVLRMVVLVFAMVCGVYICSICLQQISIRTKPKIANLQ 105
           MA+DLCFF+KD  IIK+PKKSPLVLRMVVL F MVCGVYICSICL+QISI T P I +L 
Sbjct: 1   MADDLCFFSKDAFIIKSPKKSPLVLRMVVLAFVMVCGVYICSICLKQISISTNPGIFSLG 60

Query: 104 LVHRPCEASGIEEWEIPYVHFPSPKTYDRSECAC 3
           ++ +PC    I+ WEIPYVH+P PKTY R+EC C
Sbjct: 61  VIEKPCPEPNIQPWEIPYVHYPKPKTYSRAECMC 94


>ref|XP_002327114.1| predicted protein [Populus trichocarpa] gi|222835429|gb|EEE73864.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score =  142 bits (357), Expect = 4e-32
 Identities = 60/94 (63%), Positives = 75/94 (79%)
 Frame = -3

Query: 284 MAEDLCFFTKDTLIIKAPKKSPLVLRMVVLVFAMVCGVYICSICLQQISIRTKPKIANLQ 105
           M EDLCFF KD L+IK PKKSPL+LR+VV+ FAMVCGVYICSIC++QIS  T  K  N++
Sbjct: 1   MTEDLCFFNKDALVIKGPKKSPLLLRLVVVAFAMVCGVYICSICIKQISPHTTAKFLNIR 60

Query: 104 LVHRPCEASGIEEWEIPYVHFPSPKTYDRSECAC 3
           +  +PC +S +EEWE PYVH+P P+T+ R ECAC
Sbjct: 61  IFDQPCNSSNVEEWEKPYVHYPKPETFSREECAC 94


>ref|XP_002285039.1| PREDICTED: nodulation protein H [Vitis vinifera]
           gi|297741312|emb|CBI32443.3| unnamed protein product
           [Vitis vinifera]
          Length = 344

 Score =  138 bits (347), Expect = 5e-31
 Identities = 63/94 (67%), Positives = 73/94 (77%)
 Frame = -3

Query: 284 MAEDLCFFTKDTLIIKAPKKSPLVLRMVVLVFAMVCGVYICSICLQQISIRTKPKIANLQ 105
           MA+DLCFFTKD+ + KAPKKSPLVLRM+VLVFAMVCGVYICSICL+QIS        N++
Sbjct: 1   MADDLCFFTKDSFVFKAPKKSPLVLRMIVLVFAMVCGVYICSICLKQISTTATAGFLNVE 60

Query: 104 LVHRPCEASGIEEWEIPYVHFPSPKTYDRSECAC 3
           L  RPCE   IE  E+ YVHFP P +Y R+ECAC
Sbjct: 61  LTERPCEKPNIEPSEVRYVHFPKPISYSRAECAC 94


>ref|XP_002313841.1| predicted protein [Populus trichocarpa] gi|222850249|gb|EEE87796.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score =  137 bits (345), Expect = 9e-31
 Identities = 64/95 (67%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
 Frame = -3

Query: 284 MAEDLCFF-TKDTLIIKAPKKSPLVLRMVVLVFAMVCGVYICSICLQQISIRTKPKIANL 108
           MA+D  FF +KD+ +IKAPKKSPL LRMVVLVFAMVCGVYICSICL+QI IRT P   N+
Sbjct: 1   MADDPFFFCSKDSFLIKAPKKSPLALRMVVLVFAMVCGVYICSICLKQIGIRTNPGFLNV 60

Query: 107 QLVHRPCEASGIEEWEIPYVHFPSPKTYDRSECAC 3
           +++ RPC    IE WEIPYVH+P P TY R EC C
Sbjct: 61  EVIERPCPEPNIEPWEIPYVHYPKPITYSRVECKC 95


>ref|XP_002330322.1| predicted protein [Populus trichocarpa] gi|222871357|gb|EEF08488.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score =  135 bits (340), Expect = 3e-30
 Identities = 60/85 (70%), Positives = 69/85 (81%)
 Frame = -3

Query: 257 KDTLIIKAPKKSPLVLRMVVLVFAMVCGVYICSICLQQISIRTKPKIANLQLVHRPCEAS 78
           +D+ IIKAPKKSPL LRMVVLVFAMVCGVYICSICL+QI IRT P   N++++ RPC   
Sbjct: 1   QDSFIIKAPKKSPLALRMVVLVFAMVCGVYICSICLKQIGIRTNPGFLNVEVIERPCPEP 60

Query: 77  GIEEWEIPYVHFPSPKTYDRSECAC 3
            IE WEIPYVH+P PKTY R+EC C
Sbjct: 61  NIEPWEIPYVHYPRPKTYSRAECKC 85


Top