BLASTX nr result
ID: Cimicifuga21_contig00032320
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00032320 (241 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271867.1| PREDICTED: uncharacterized protein LOC100263... 77 2e-12 ref|XP_002276324.1| PREDICTED: uncharacterized protein LOC100256... 76 2e-12 emb|CAN77553.1| hypothetical protein VITISV_017397 [Vitis vinifera] 76 2e-12 ref|XP_002276370.1| PREDICTED: uncharacterized protein LOC100245... 75 4e-12 ref|XP_002871294.1| mitochondrial transcription termination fact... 74 9e-12 >ref|XP_002271867.1| PREDICTED: uncharacterized protein LOC100263451 [Vitis vinifera] Length = 412 Score = 76.6 bits (187), Expect = 2e-12 Identities = 41/79 (51%), Positives = 54/79 (68%) Frame = -3 Query: 239 LSEKKITGTMNFLVNKMSYDPLLIAQTPSLLLYSLKKRIIPRLSVIQVLISNGFLEKDCR 60 LSEKKI TM+FLVNKM + I + PS L YSL+KRIIPR SV +VLI G ++KD Sbjct: 300 LSEKKIMSTMDFLVNKMGWKLTAITKVPSTLSYSLEKRIIPRCSVARVLILKGLVKKDMG 359 Query: 59 IYSALQRNEEDFMKKFVTK 3 + + L+ E+ F+ +FV K Sbjct: 360 LGAFLRFTEKKFLDRFVIK 378 >ref|XP_002276324.1| PREDICTED: uncharacterized protein LOC100256384 [Vitis vinifera] Length = 396 Score = 76.3 bits (186), Expect = 2e-12 Identities = 39/76 (51%), Positives = 53/76 (69%) Frame = -3 Query: 236 SEKKITGTMNFLVNKMSYDPLLIAQTPSLLLYSLKKRIIPRLSVIQVLISNGFLEKDCRI 57 SE KI TM+F VNKM + LIA+ P L+ +SL+KRIIPR SV+QVL+S G ++KD + Sbjct: 294 SEDKIMTTMDFFVNKMGRESSLIARRPVLISHSLEKRIIPRYSVVQVLLSKGLIDKDFSL 353 Query: 56 YSALQRNEEDFMKKFV 9 + Q E+ F+ KFV Sbjct: 354 PTVFQSTEKMFLHKFV 369 >emb|CAN77553.1| hypothetical protein VITISV_017397 [Vitis vinifera] Length = 719 Score = 76.3 bits (186), Expect = 2e-12 Identities = 39/76 (51%), Positives = 53/76 (69%) Frame = -3 Query: 236 SEKKITGTMNFLVNKMSYDPLLIAQTPSLLLYSLKKRIIPRLSVIQVLISNGFLEKDCRI 57 SE KI TM+F VNKM + LIA+ P L+ +SL+KRIIPR SV+QVL+S G ++KD + Sbjct: 291 SEDKIMTTMDFFVNKMGRESSLIARRPVLISHSLEKRIIPRYSVVQVLLSKGLIDKDFSL 350 Query: 56 YSALQRNEEDFMKKFV 9 + Q E+ F+ KFV Sbjct: 351 PTVFQSTEKMFLHKFV 366 >ref|XP_002276370.1| PREDICTED: uncharacterized protein LOC100245862 [Vitis vinifera] Length = 403 Score = 75.5 bits (184), Expect = 4e-12 Identities = 39/77 (50%), Positives = 51/77 (66%) Frame = -3 Query: 239 LSEKKITGTMNFLVNKMSYDPLLIAQTPSLLLYSLKKRIIPRLSVIQVLISNGFLEKDCR 60 LSE K+ TM+F VNKM ++ IA+ P LL SL+KRIIPR SV+QVL+S G + KD Sbjct: 286 LSEDKLMATMDFYVNKMGWESSFIARRPVLLSLSLEKRIIPRYSVVQVLLSKGLINKDIS 345 Query: 59 IYSALQRNEEDFMKKFV 9 + E+ FM+KFV Sbjct: 346 PRVLFESTEQKFMQKFV 362 >ref|XP_002871294.1| mitochondrial transcription termination factor family protein [Arabidopsis lyrata subsp. lyrata] gi|297317131|gb|EFH47553.1| mitochondrial transcription termination factor family protein [Arabidopsis lyrata subsp. lyrata] Length = 404 Score = 74.3 bits (181), Expect = 9e-12 Identities = 39/79 (49%), Positives = 55/79 (69%) Frame = -3 Query: 239 LSEKKITGTMNFLVNKMSYDPLLIAQTPSLLLYSLKKRIIPRLSVIQVLISNGFLEKDCR 60 LSE+KI TM F VN+M+ P IA+ P +L +SL+KRIIPR SV +VL+SNG +++D Sbjct: 308 LSERKINRTMEFFVNEMNLAPRSIAECPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 367 Query: 59 IYSALQRNEEDFMKKFVTK 3 + S L E+ F++K V K Sbjct: 368 LTSLLVPVEKVFLEKLVIK 386