BLASTX nr result

ID: Cimicifuga21_contig00032320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032320
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271867.1| PREDICTED: uncharacterized protein LOC100263...    77   2e-12
ref|XP_002276324.1| PREDICTED: uncharacterized protein LOC100256...    76   2e-12
emb|CAN77553.1| hypothetical protein VITISV_017397 [Vitis vinifera]    76   2e-12
ref|XP_002276370.1| PREDICTED: uncharacterized protein LOC100245...    75   4e-12
ref|XP_002871294.1| mitochondrial transcription termination fact...    74   9e-12

>ref|XP_002271867.1| PREDICTED: uncharacterized protein LOC100263451 [Vitis vinifera]
          Length = 412

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/79 (51%), Positives = 54/79 (68%)
 Frame = -3

Query: 239 LSEKKITGTMNFLVNKMSYDPLLIAQTPSLLLYSLKKRIIPRLSVIQVLISNGFLEKDCR 60
           LSEKKI  TM+FLVNKM +    I + PS L YSL+KRIIPR SV +VLI  G ++KD  
Sbjct: 300 LSEKKIMSTMDFLVNKMGWKLTAITKVPSTLSYSLEKRIIPRCSVARVLILKGLVKKDMG 359

Query: 59  IYSALQRNEEDFMKKFVTK 3
           + + L+  E+ F+ +FV K
Sbjct: 360 LGAFLRFTEKKFLDRFVIK 378


>ref|XP_002276324.1| PREDICTED: uncharacterized protein LOC100256384 [Vitis vinifera]
          Length = 396

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 39/76 (51%), Positives = 53/76 (69%)
 Frame = -3

Query: 236 SEKKITGTMNFLVNKMSYDPLLIAQTPSLLLYSLKKRIIPRLSVIQVLISNGFLEKDCRI 57
           SE KI  TM+F VNKM  +  LIA+ P L+ +SL+KRIIPR SV+QVL+S G ++KD  +
Sbjct: 294 SEDKIMTTMDFFVNKMGRESSLIARRPVLISHSLEKRIIPRYSVVQVLLSKGLIDKDFSL 353

Query: 56  YSALQRNEEDFMKKFV 9
            +  Q  E+ F+ KFV
Sbjct: 354 PTVFQSTEKMFLHKFV 369


>emb|CAN77553.1| hypothetical protein VITISV_017397 [Vitis vinifera]
          Length = 719

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 39/76 (51%), Positives = 53/76 (69%)
 Frame = -3

Query: 236 SEKKITGTMNFLVNKMSYDPLLIAQTPSLLLYSLKKRIIPRLSVIQVLISNGFLEKDCRI 57
           SE KI  TM+F VNKM  +  LIA+ P L+ +SL+KRIIPR SV+QVL+S G ++KD  +
Sbjct: 291 SEDKIMTTMDFFVNKMGRESSLIARRPVLISHSLEKRIIPRYSVVQVLLSKGLIDKDFSL 350

Query: 56  YSALQRNEEDFMKKFV 9
            +  Q  E+ F+ KFV
Sbjct: 351 PTVFQSTEKMFLHKFV 366


>ref|XP_002276370.1| PREDICTED: uncharacterized protein LOC100245862 [Vitis vinifera]
          Length = 403

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 39/77 (50%), Positives = 51/77 (66%)
 Frame = -3

Query: 239 LSEKKITGTMNFLVNKMSYDPLLIAQTPSLLLYSLKKRIIPRLSVIQVLISNGFLEKDCR 60
           LSE K+  TM+F VNKM ++   IA+ P LL  SL+KRIIPR SV+QVL+S G + KD  
Sbjct: 286 LSEDKLMATMDFYVNKMGWESSFIARRPVLLSLSLEKRIIPRYSVVQVLLSKGLINKDIS 345

Query: 59  IYSALQRNEEDFMKKFV 9
                +  E+ FM+KFV
Sbjct: 346 PRVLFESTEQKFMQKFV 362


>ref|XP_002871294.1| mitochondrial transcription termination factor family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297317131|gb|EFH47553.1| mitochondrial transcription
           termination factor family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 404

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 39/79 (49%), Positives = 55/79 (69%)
 Frame = -3

Query: 239 LSEKKITGTMNFLVNKMSYDPLLIAQTPSLLLYSLKKRIIPRLSVIQVLISNGFLEKDCR 60
           LSE+KI  TM F VN+M+  P  IA+ P +L +SL+KRIIPR SV +VL+SNG +++D  
Sbjct: 308 LSERKINRTMEFFVNEMNLAPRSIAECPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 367

Query: 59  IYSALQRNEEDFMKKFVTK 3
           + S L   E+ F++K V K
Sbjct: 368 LTSLLVPVEKVFLEKLVIK 386


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