BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032313
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containi...   116   2e-24
ref|XP_002515418.1| pentatricopeptide repeat-containing protein,...   104   9e-21
ref|XP_002308709.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    97   1e-18
ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containi...    97   1e-18

>ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic [Vitis vinifera]
            gi|296082142|emb|CBI21147.3| unnamed protein product
            [Vitis vinifera]
          Length = 1113

 Score =  116 bits (290), Expect = 2e-24
 Identities = 54/58 (93%), Positives = 55/58 (94%)
 Frame = -1

Query: 378  YEELQLKGFEPNFFTYNALIRGYSMSGNPDRAYAVYKKMMVGGCTPNTGTFAQLPNQS 205
            YEELQLKG EPN FTYNALIRG+SMSGNPDRAYAVYKKMMVGGC PNTGTFAQLPNQS
Sbjct: 1056 YEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQLPNQS 1113


>ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545362|gb|EEF46867.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1113

 Score =  104 bits (259), Expect = 9e-21
 Identities = 48/56 (85%), Positives = 50/56 (89%)
 Frame = -1

Query: 378  YEELQLKGFEPNFFTYNALIRGYSMSGNPDRAYAVYKKMMVGGCTPNTGTFAQLPN 211
            YEELQ  G EPN FTYNALIRGYSMSGN D AYAVYK+MMVGGC+PNTGTFAQLPN
Sbjct: 1058 YEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQLPN 1113


>ref|XP_002308709.1| predicted protein [Populus trichocarpa] gi|222854685|gb|EEE92232.1|
            predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  100 bits (249), Expect = 1e-19
 Identities = 45/58 (77%), Positives = 50/58 (86%)
 Frame = -1

Query: 378  YEELQLKGFEPNFFTYNALIRGYSMSGNPDRAYAVYKKMMVGGCTPNTGTFAQLPNQS 205
            YEELQ  G +PN FTYNALIRGY++SGN + AY +YKKMMVGGC PNTGTFAQLPNQS
Sbjct: 1058 YEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQLPNQS 1115


>ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 44/58 (75%), Positives = 48/58 (82%)
 Frame = -1

Query: 378  YEELQLKGFEPNFFTYNALIRGYSMSGNPDRAYAVYKKMMVGGCTPNTGTFAQLPNQS 205
            YEELQL G EP+ FTYNALIRGYS+S NP+ AY VYK MMV GC PN GT+AQLPNQS
Sbjct: 1056 YEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPNQS 1113


>ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 44/58 (75%), Positives = 48/58 (82%)
 Frame = -1

Query: 378  YEELQLKGFEPNFFTYNALIRGYSMSGNPDRAYAVYKKMMVGGCTPNTGTFAQLPNQS 205
            YEELQL G EP+ FTYNALIRGYS+S NP+ AY VYK MMV GC PN GT+AQLPNQS
Sbjct: 1056 YEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPNQS 1113