BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032306
         (812 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containi...   131   2e-28
ref|XP_002324074.1| predicted protein [Populus trichocarpa] gi|2...   120   5e-25
ref|XP_003554900.1| PREDICTED: pentatricopeptide repeat-containi...   117   3e-24
ref|XP_003618546.1| Pentatricopeptide repeat-containing protein ...   102   1e-19
ref|XP_002873720.1| pentatricopeptide repeat-containing protein ...    97   4e-18

>ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
           mitochondrial-like [Vitis vinifera]
          Length = 632

 Score =  131 bits (329), Expect = 2e-28
 Identities = 76/159 (47%), Positives = 105/159 (66%), Gaps = 3/159 (1%)
 Frame = -3

Query: 810 KFHLGEGLLQELIKIEPHHTECHVLLSNMYTLAGRQDKADSLREILKTRGITKVPGMSCI 631
           K  LGE LLQEL++++P +TE H+LLSNMY LAG+Q++A+SLR++LK RGI KVPGMS I
Sbjct: 435 KLQLGEHLLQELVQLDPQNTEYHILLSNMYALAGKQNRANSLRQVLKKRGIKKVPGMSSI 494

Query: 630 LVCGQVHRFSSGEKLHPRTQDLYTMIHD--*KLEIG**CPKHRL*SII-CFCK*DGVVNV 460
            V GQVH+FS+G+K HPRT+++Y M+ +   +L +    P   L +   C    D +V  
Sbjct: 495 HVGGQVHQFSAGDKSHPRTREVYNMLDEMIPRLRLAGYAPNTALQTFAGCDSLEDDLVE- 553

Query: 459 TKEKEQALFKCD*GEGTSTFFHNQKLAIALWFLSTRPGM 343
            +EKEQALF            H++KLAI    +ST PG+
Sbjct: 554 QEEKEQALFS-----------HSEKLAICFGLISTGPGV 581


>ref|XP_002324074.1| predicted protein [Populus trichocarpa] gi|222867076|gb|EEF04207.1|
           predicted protein [Populus trichocarpa]
          Length = 636

 Score =  120 bits (300), Expect = 5e-25
 Identities = 69/157 (43%), Positives = 99/157 (63%), Gaps = 2/157 (1%)
 Frame = -3

Query: 810 KFHLGEGLLQELIKIEPHHTECHVLLSNMYTLAGRQDKADSLREILKTRGITKVPGMSCI 631
           K  LGE +LQELI+++ H+TE HVLLSNMY L G+QDKA+SLR+ILK++GI KVPG+S I
Sbjct: 439 KLQLGERILQELIQMDGHNTEYHVLLSNMYVLEGKQDKANSLRQILKSKGIRKVPGVSSI 498

Query: 630 LVCGQVHRFSSGEKLHPRTQDLYTMIHD--*KLEIG**CPKHRL*SIICFCK*DGVVNVT 457
            V G +H+FS+G+K HP T+++Y  +++   +L +    P             +G     
Sbjct: 499 YVGGNIHQFSAGDKSHPLTKEIYHALNNMIQRLRLAGYVPNTTNQVFPGSDGREGSSEEM 558

Query: 456 KEKEQALFKCD*GEGTSTFFHNQKLAIALWFLSTRPG 346
           +EKEQAL           F H++KLA+    +ST+PG
Sbjct: 559 EEKEQAL-----------FLHSEKLAVCFGHISTKPG 584


>ref|XP_003554900.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
           mitochondrial-like [Glycine max]
          Length = 629

 Score =  117 bits (293), Expect = 3e-24
 Identities = 66/154 (42%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
 Frame = -3

Query: 810 KFHLGEGLLQELIKIEPHHTECHVLLSNMYTLAGRQDKADSLREILKTRGITKVPGMSCI 631
           K  LGE +++EL++++P +TE H+LLSNMY L G+ DKA+SLR++LK RGI KVPGMS I
Sbjct: 432 KLRLGEKIMRELVQMDPLNTEYHILLSNMYALCGKADKANSLRKVLKNRGIRKVPGMSSI 491

Query: 630 LVCGQVHRFSSGEKLHPRTQDLYTMIHD--*KLEIG**CPKHRL*SIICFCK*DGVVNVT 457
            V GQ+HRF +G+K HPRT D+Y  + D   KL +    P      +      D  +   
Sbjct: 492 YVDGQLHRFIAGDKSHPRTADIYMKLDDMICKLRLAGYVPNTNCQVLFGCSNGDDCMEAF 551

Query: 456 KEKEQALFKCD*GEGTSTFFHNQKLAIALWFLST 355
           +E EQ LF            H++KLA+    +ST
Sbjct: 552 EEVEQVLFT-----------HSEKLALCFGLMST 574


>ref|XP_003618546.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355493561|gb|AES74764.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 637

 Score =  102 bits (254), Expect = 1e-19
 Identities = 61/164 (37%), Positives = 94/164 (57%), Gaps = 9/164 (5%)
 Frame = -3

Query: 810 KFHLGEGLLQELIKIEPHHTECHVLLSNMYTLAGRQDKADSLREILKTRGITKVPGMSCI 631
           +  LGE ++++L++++P +TE H++LSNMY L+G+ +KA+SLR++LK RGI KVPGMS I
Sbjct: 440 RLQLGEKIMRDLLEMDPLNTEYHIVLSNMYALSGKVEKANSLRQVLKKRGIKKVPGMSSI 499

Query: 630 LVCGQVHRFSSGEKLHPRTQDLYTMIHD*KLEIG**CPKHRL*SIICFCK*DGVVNVTKE 451
            V G++H+F +G+K H RT ++Y                 +L  +IC  +  G V  T  
Sbjct: 500 YVDGKLHQFIAGDKSHTRTSEIYM----------------KLDEMICRLRSAGYVPNT-- 541

Query: 450 KEQALFKCD*GEGTS---------TFFHNQKLAIALWFLSTRPG 346
             Q LF C   +  S          F H++KLA+    +ST  G
Sbjct: 542 SCQVLFGCSNRDDCSESLEEVEQVLFTHSEKLALCFGLMSTPSG 585


>ref|XP_002873720.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297319557|gb|EFH49979.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 623

 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 60/158 (37%), Positives = 87/158 (55%), Gaps = 4/158 (2%)
 Frame = -3

Query: 810 KFHLGEGLLQELIKIEPHHTECHVLLSNMYTLAGRQDKADSLREILKTRGITKVPGMSCI 631
           K  + E + +ELI++ P HTE  +L+SNMY   GR D AD LR  L+ RGI K+PG+S I
Sbjct: 433 KLEIAERIKRELIQMSPGHTEYQILMSNMYVAEGRSDIADGLRGSLRNRGIRKIPGLSSI 492

Query: 630 LVCGQVHRFSSGEKLHPRTQDLYTMIHD*KLEIG**CPKHRL*SIICFCK*DGVVNVT-- 457
            V   VHRFSSG++ HPRT+++Y  +++            R+ S        G+V+ +  
Sbjct: 493 YVNDSVHRFSSGDRSHPRTKEVYLKLNE---------VIERIRSAGYVPDISGLVSPSEG 543

Query: 456 --KEKEQALFKCD*GEGTSTFFHNQKLAIALWFLSTRP 349
             +EKEQAL             H++KLA+    L T+P
Sbjct: 544 DLEEKEQAL-----------CCHSEKLAVCFGLLETKP 570