BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032290
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594188.1| F-box protein [Medicago truncatula] gi|87162...    68   7e-10
ref|XP_003594393.1| F-box protein [Medicago truncatula] gi|35548...    68   1e-09
ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus ...    65   5e-09
ref|XP_003595026.1| F-box protein [Medicago truncatula] gi|87162...    65   6e-09
ref|NP_192993.2| F-box protein CPR30 [Arabidopsis thaliana] gi|1...    61   9e-08

>ref|XP_003594188.1| F-box protein [Medicago truncatula] gi|87162697|gb|ABD28492.1|
           Cyclin-like F-box; F-box protein interaction domain;
           Galactose oxidase, central [Medicago truncatula]
           gi|355483236|gb|AES64439.1| F-box protein [Medicago
           truncatula]
          Length = 424

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 11/141 (7%)
 Frame = -2

Query: 499 IFVVMLDGYLCVA-RYFKTRVDLWMMKDYGVKESWTKLFAITENPTSDIKMYCLEPLYFI 323
           I V +L G LC++  Y  T++D+W+MKDYG ++SW KLF + ++   +  +  L PL + 
Sbjct: 282 IRVAVLGGCLCMSVNYEATKIDVWVMKDYGSRDSWCKLFTLVKS-CFNSPLDFLRPLCYS 340

Query: 322 GNGAKLVL-----LDKTYNQFYFYHTRDQRITRLVVEDIPKGYFTETTFREG-----LYP 173
            +G K++L     LDKT  + ++Y  + ++++   VE IP   F E  F  G      +P
Sbjct: 341 SDGGKVLLEANPNLDKTLRKLFWYDLKSEQVS--YVEGIPN--FDEAMFYVGSLVSPFFP 396

Query: 172 LATCSEVGKNWRRR*THKNKR 110
           + TC +  +      T K KR
Sbjct: 397 VDTCKKENR------TSKTKR 411


>ref|XP_003594393.1| F-box protein [Medicago truncatula] gi|355483441|gb|AES64644.1|
           F-box protein [Medicago truncatula]
          Length = 704

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 48/151 (31%), Positives = 81/151 (53%), Gaps = 11/151 (7%)
 Frame = -2

Query: 529 PDSDDEPVDS----IFVVMLDGYLCVARYFK-TRVDLWMMKDYGVKESWTKLFAITENPT 365
           PD   E V+     + V +L G LC+   +K T++D+W+MK+YG ++SW KLF + E+  
Sbjct: 261 PDEIGEEVNGESFEVHVAVLGGCLCITVDYKDTKIDVWVMKEYGCRDSWCKLFTMAES-C 319

Query: 364 SDIKMYCLEPLYFIGNGAKL------VLLDKTYNQFYFYHTRDQRITRLVVEDIPKGYFT 203
            D+ +  L P+ +  +G+K+      VLL+  + + ++Y  + ++I+   VE IP     
Sbjct: 320 FDLPLKLLRPICYSSDGSKVLLERAHVLLEVQHRKLFWYDLKSEQIS--YVEGIPPN-MN 376

Query: 202 ETTFREGLYPLATCSEVGKNWRRR*THKNKR 110
           ET F  G   L   S    N R++  H +KR
Sbjct: 377 ETMFCVG--SLVPPSFPVDNRRKKENHPSKR 405


>ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534616|gb|EEF36313.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 414

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 44/118 (37%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
 Frame = -2

Query: 463 ARYFKTRVDLWMMKDYGVKESWTKLFAITENPTSDIKMYCLEPLYFIGNGAKLVLLDKTY 284
           A Y  TR+D+W+MK+YG K+SWT+LF+ T N    +K  CL  L F  N  + VLL    
Sbjct: 273 AIYNNTRLDIWVMKEYGAKDSWTRLFSFTPNVVPFVK--CLRTLVFSKNRDE-VLLGLQD 329

Query: 283 NQFYFYHTRDQRITRLVVEDIPKGYFTETTFREGLYPLATCSEV-GKNWRRR*THKNK 113
               +Y  R++R+ R+ +  I    FT   F   L PL+   E   K  R R   KN+
Sbjct: 330 KNLLWYKIREKRVKRVEIH-IVVTLFTMQVFHGSLVPLSVNKETDSKKARPRKGKKNR 386


>ref|XP_003595026.1| F-box protein [Medicago truncatula] gi|87162818|gb|ABD28613.1|
           Cyclin-like F-box; F-box protein interaction domain;
           Galactose oxidase, central, putative [Medicago
           truncatula] gi|355484074|gb|AES65277.1| F-box protein
           [Medicago truncatula]
          Length = 172

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 36/105 (34%), Positives = 62/105 (59%), Gaps = 7/105 (6%)
 Frame = -2

Query: 499 IFVVMLDGYLCVA-RYFKTRVDLWMMKDYGVKESWTKLFAITENPTSDIKMYCLEPLYFI 323
           I V +L G LC+   Y  T++D+W+MK+YG ++SW KLF + ++  +    Y   P+ + 
Sbjct: 52  IDVAVLGGCLCITVNYETTKIDVWVMKEYGYRDSWCKLFTLVKSCFTSHLRYS-NPIGYS 110

Query: 322 GNGAKL------VLLDKTYNQFYFYHTRDQRITRLVVEDIPKGYF 206
            +G+K+      VLLD  Y + ++Y  + +R++   VE IPK +F
Sbjct: 111 SDGSKVLFEGIEVLLDVHYKKLFWYDLKSERVS--YVEGIPKLFF 153


>ref|NP_192993.2| F-box protein CPR30 [Arabidopsis thaliana]
           gi|145333023|ref|NP_001078377.1| F-box protein CPR30
           [Arabidopsis thaliana]
           gi|142989747|sp|Q9SU30.2|CPR30_ARATH RecName: Full=F-box
           protein CPR30; AltName: Full=Protein CONSTITUTIVE
           EXPRESSER OF PR GENES 30 gi|332657747|gb|AEE83147.1|
           F-box protein CPR30 [Arabidopsis thaliana]
           gi|332657748|gb|AEE83148.1| F-box protein CPR30
           [Arabidopsis thaliana]
          Length = 413

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
 Frame = -2

Query: 487 MLDGYLCV-ARYFKTRVDLWMMKDYGVKESWTKLFAITENPTSDIKMYCLEPLYFIGNGA 311
           +LDG LC+   Y ++ VD+WMMK+Y V++SWTK+F + + P S      + PL +     
Sbjct: 267 VLDGCLCLMCNYDQSYVDVWMMKEYNVRDSWTKVFTV-QKPKSVKSFSYMRPLVY-SKDK 324

Query: 310 KLVLLDKTYNQFYFYHTRDQRITRLVVEDIPKGYFTE 200
           K VLL+    +  ++    ++++ L ++D P  Y  E
Sbjct: 325 KKVLLELNNTKLVWFDLESKKMSTLRIKDCPSSYSAE 361