BLASTX nr result

ID: Cimicifuga21_contig00032252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032252
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266551.2| PREDICTED: CCA tRNA nucleotidyltransferase, ...   126   2e-27
emb|CBI18302.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_002327340.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-26
ref|XP_004171177.1| PREDICTED: CCA tRNA nucleotidyltransferase, ...   122   3e-26
ref|XP_004140936.1| PREDICTED: CCA tRNA nucleotidyltransferase, ...   122   3e-26

>ref|XP_002266551.2| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial [Vitis
           vinifera]
          Length = 564

 Score =  126 bits (317), Expect = 2e-27
 Identities = 64/104 (61%), Positives = 77/104 (74%)
 Frame = +1

Query: 40  AMGPIQFQLKEKVDLTQNEEQIFQLLIEVIRYFDLDTKLRVAGGWVRDKLLGQESNDIDT 219
           A  P   Q+++ +DLT  E QIFQ L++V+R+F L T+LRVAGGWVRDKLLG+E  DID 
Sbjct: 47  ASSPPSVQVRDSIDLTPKETQIFQKLLQVVRHFSLRTQLRVAGGWVRDKLLGKECYDIDI 106

Query: 220 AIDNMLGREFCEKIKEYLLYIGEEGKHDFTVIPSNPAQSKHLET 351
           A+D+MLGREFCEKI +YL   GEE K    VI  NP QSKHLET
Sbjct: 107 ALDDMLGREFCEKINDYLSCTGEE-KQGIGVIQCNPDQSKHLET 149


>emb|CBI18302.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  126 bits (317), Expect = 2e-27
 Identities = 64/104 (61%), Positives = 77/104 (74%)
 Frame = +1

Query: 40  AMGPIQFQLKEKVDLTQNEEQIFQLLIEVIRYFDLDTKLRVAGGWVRDKLLGQESNDIDT 219
           A  P   Q+++ +DLT  E QIFQ L++V+R+F L T+LRVAGGWVRDKLLG+E  DID 
Sbjct: 2   ASSPPSVQVRDSIDLTPKETQIFQKLLQVVRHFSLRTQLRVAGGWVRDKLLGKECYDIDI 61

Query: 220 AIDNMLGREFCEKIKEYLLYIGEEGKHDFTVIPSNPAQSKHLET 351
           A+D+MLGREFCEKI +YL   GEE K    VI  NP QSKHLET
Sbjct: 62  ALDDMLGREFCEKINDYLSCTGEE-KQGIGVIQCNPDQSKHLET 104


>ref|XP_002327340.1| predicted protein [Populus trichocarpa] gi|222835710|gb|EEE74145.1|
           predicted protein [Populus trichocarpa]
          Length = 528

 Score =  123 bits (309), Expect = 1e-26
 Identities = 60/97 (61%), Positives = 77/97 (79%)
 Frame = +1

Query: 61  QLKEKVDLTQNEEQIFQLLIEVIRYFDLDTKLRVAGGWVRDKLLGQESNDIDTAIDNMLG 240
           ++K+K++L + E+QIF  L+  +R+F+L+T+LRVAGGWVRDKLLG+E  DID AIDNMLG
Sbjct: 15  EVKDKIELNEVEKQIFDRLVNTLRHFNLNTELRVAGGWVRDKLLGKECCDIDIAIDNMLG 74

Query: 241 REFCEKIKEYLLYIGEEGKHDFTVIPSNPAQSKHLET 351
            EF +K++EYLL  GEE  H   VIP NP QSKHLET
Sbjct: 75  SEFVDKVREYLLSTGEEA-HGVGVIPRNPDQSKHLET 110


>ref|XP_004171177.1| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial-like
           [Cucumis sativus]
          Length = 577

 Score =  122 bits (306), Expect = 3e-26
 Identities = 58/97 (59%), Positives = 77/97 (79%)
 Frame = +1

Query: 61  QLKEKVDLTQNEEQIFQLLIEVIRYFDLDTKLRVAGGWVRDKLLGQESNDIDTAIDNMLG 240
           Q+K+ ++LT+ EE+IF  L+  +R+F+L T+LRVAGGWVRDKLLG++  DID A+DNMLG
Sbjct: 62  QVKDNIELTETEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDCYDIDIALDNMLG 121

Query: 241 REFCEKIKEYLLYIGEEGKHDFTVIPSNPAQSKHLET 351
            EF +K++EYLL +GEE +    VIP NP QSKHLET
Sbjct: 122 SEFVDKVREYLLTVGEEAQ-GVAVIPCNPDQSKHLET 157


>ref|XP_004140936.1| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial-like
           [Cucumis sativus]
          Length = 577

 Score =  122 bits (306), Expect = 3e-26
 Identities = 58/97 (59%), Positives = 77/97 (79%)
 Frame = +1

Query: 61  QLKEKVDLTQNEEQIFQLLIEVIRYFDLDTKLRVAGGWVRDKLLGQESNDIDTAIDNMLG 240
           Q+K+ ++LT+ EE+IF  L+  +R+F+L T+LRVAGGWVRDKLLG++  DID A+DNMLG
Sbjct: 62  QVKDNIELTETEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDCYDIDIALDNMLG 121

Query: 241 REFCEKIKEYLLYIGEEGKHDFTVIPSNPAQSKHLET 351
            EF +K++EYLL +GEE +    VIP NP QSKHLET
Sbjct: 122 SEFVDKVREYLLTVGEEAQ-GVAVIPCNPDQSKHLET 157


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