BLASTX nr result

ID: Cimicifuga21_contig00032250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032250
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264927.2| PREDICTED: E3 ubiquitin-protein ligase PUB23...   131   5e-29
ref|XP_002264761.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   123   2e-26
ref|XP_004160699.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   114   8e-24
ref|XP_004145071.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   112   2e-23
ref|XP_004155855.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   112   3e-23

>ref|XP_002264927.2| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Vitis vinifera]
          Length = 413

 Score =  131 bits (330), Expect = 5e-29
 Identities = 60/91 (65%), Positives = 77/91 (84%)
 Frame = -3

Query: 344 SKKILRVSELTTKLGVKILWLISTFHPTEKVLEEMLMFGSVKKLLGLLHIDGRSSTKDKA 165
           SKK+L VS   TK+ VKILWLI ++HP+E+VLEE+L+FGSVKKLL LLHID RSSTK+K 
Sbjct: 322 SKKLLHVSSAATKITVKILWLICSYHPSERVLEELLIFGSVKKLLALLHIDNRSSTKEKV 381

Query: 164 LKIIKVHGSKWKKYPCFPNELRDYLGLMHNS 72
           +KI K+HG+ W++ PCFP EL+D+LGLM+ S
Sbjct: 382 VKIFKLHGNSWRQNPCFPCELKDHLGLMNGS 412


>ref|XP_002264761.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Vitis vinifera]
          Length = 411

 Score =  123 bits (308), Expect = 2e-26
 Identities = 57/91 (62%), Positives = 74/91 (81%)
 Frame = -3

Query: 344 SKKILRVSELTTKLGVKILWLISTFHPTEKVLEEMLMFGSVKKLLGLLHIDGRSSTKDKA 165
           SKK+L VS  +TK+ VKILWLI ++HP+E+VLEEML+ GSVKKLL LLHI  RSSTK+K 
Sbjct: 320 SKKLLHVSSASTKITVKILWLICSYHPSERVLEEMLILGSVKKLLVLLHIGNRSSTKEKV 379

Query: 164 LKIIKVHGSKWKKYPCFPNELRDYLGLMHNS 72
           +KI ++H + W++YPCFP EL+DY GL + S
Sbjct: 380 VKIFRLHRNSWRQYPCFPWELKDYSGLTNQS 410


>ref|XP_004160699.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Cucumis sativus]
          Length = 152

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/88 (59%), Positives = 73/88 (82%), Gaps = 1/88 (1%)
 Frame = -3

Query: 338 KILRVSELTTKLGVKILWLISTFHPTEKVLEEMLMFGSVKKLLGLLHI-DGRSSTKDKAL 162
           K + +S   TK+G+KILWLI  +HP+E+VLEEM+  G+VKKLLG+L+  DGRSSTK+KA+
Sbjct: 64  KKMSISNTATKIGMKILWLICNYHPSERVLEEMMGCGTVKKLLGILNNGDGRSSTKEKAM 123

Query: 161 KIIKVHGSKWKKYPCFPNELRDYLGLMH 78
           K++K+HGS W+++PCFP E RDYL L++
Sbjct: 124 KVMKLHGSFWRRFPCFPYEYRDYLKLIN 151


>ref|XP_004145071.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Cucumis sativus]
           gi|449473799|ref|XP_004153986.1| PREDICTED: E3
           ubiquitin-protein ligase PUB23-like [Cucumis sativus]
          Length = 152

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/88 (59%), Positives = 72/88 (81%), Gaps = 1/88 (1%)
 Frame = -3

Query: 338 KILRVSELTTKLGVKILWLISTFHPTEKVLEEMLMFGSVKKLLGLLHI-DGRSSTKDKAL 162
           K + +S   TK+G+KILWLI  +HP+E+VLEEM+  G+VKKLLG+L+  DGRSSTK+KA 
Sbjct: 64  KKMSISNTATKIGMKILWLICNYHPSERVLEEMMGCGTVKKLLGILNNGDGRSSTKEKAK 123

Query: 161 KIIKVHGSKWKKYPCFPNELRDYLGLMH 78
           K++K+HGS W+++PCFP E RDYL L++
Sbjct: 124 KVMKLHGSFWRRFPCFPYEYRDYLKLIN 151


>ref|XP_004155855.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Cucumis sativus]
          Length = 365

 Score =  112 bits (280), Expect = 3e-23
 Identities = 53/97 (54%), Positives = 77/97 (79%), Gaps = 7/97 (7%)
 Frame = -3

Query: 344 SKKILRVSELTTKLGVKILWLISTFHPTEKVLEEMLMFGSVKKLLGLLHID-------GR 186
           +KKIL VS + TK+GVKIL  IS+FHP E+V++EM+  G+VKKLL +LH+D       GR
Sbjct: 268 TKKILNVSYVATKIGVKILLWISSFHPRERVVDEMMACGAVKKLLMILHMDSAGVGDGGR 327

Query: 185 SSTKDKALKIIKVHGSKWKKYPCFPNELRDYLGLMHN 75
           SSTK+K +KI+K+HG+KW++ PCFP+EL++YL  +++
Sbjct: 328 SSTKEKVIKILKMHGNKWRRSPCFPSELKNYLKFVND 364


Top