BLASTX nr result

ID: Cimicifuga21_contig00032242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032242
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323744.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002323743.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09

>ref|XP_002323744.1| predicted protein [Populus trichocarpa] gi|222866746|gb|EEF03877.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/90 (40%), Positives = 48/90 (53%)
 Frame = -2

Query: 270 FSGLKEEFYYSEAFTAGGHDWKILVYPKGHXXXXXXXXXXXXXXXYPEKFSPGIEVPVRF 91
           FSGL  EFYYS+ + AGGH+WK+ ++PKGH                  K   G ++ V F
Sbjct: 163 FSGLTGEFYYSQVYLAGGHEWKLKLFPKGHIKQRGKYLSLFLELDDCTKSHTGWKLFVEF 222

Query: 90  TLRVLDQENKNHSEKELGKSACLSASNKDW 1
           TLR+ DQ   +H EK + K    SAS  +W
Sbjct: 223 TLRIKDQVQSHHHEKTIHK--WFSASENNW 250


>ref|XP_002323743.1| predicted protein [Populus trichocarpa] gi|222866745|gb|EEF03876.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/90 (37%), Positives = 45/90 (50%)
 Frame = -2

Query: 270 FSGLKEEFYYSEAFTAGGHDWKILVYPKGHXXXXXXXXXXXXXXXYPEKFSPGIEVPVRF 91
           FSGL  EFYYS+ + AGGH+WK+ ++P GH                   +  G ++ V F
Sbjct: 184 FSGLTGEFYYSQVYLAGGHEWKLKLFPNGHIKQRGKYLSLFVELDDCTNYHTGWKLFVEF 243

Query: 90  TLRVLDQENKNHSEKELGKSACLSASNKDW 1
           TLR+ DQ    H EK   K    SAS  +W
Sbjct: 244 TLRIKDQVQSQHREKTFHK--WFSASENNW 271


Top