BLASTX nr result

ID: Cimicifuga21_contig00032225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032225
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512885.1| conserved hypothetical protein [Ricinus comm...   128   9e-28
ref|XP_002300133.1| predicted protein [Populus trichocarpa] gi|2...   127   2e-27
ref|XP_002264458.1| PREDICTED: uncharacterized protein LOC100264...   118   7e-25
ref|XP_004140549.1| PREDICTED: uncharacterized protein LOC101220...   114   1e-23
gb|AFK38053.1| unknown [Lotus japonicus]                              114   2e-23

>ref|XP_002512885.1| conserved hypothetical protein [Ricinus communis]
           gi|223547896|gb|EEF49388.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 81

 Score =  128 bits (321), Expect = 9e-28
 Identities = 63/80 (78%), Positives = 71/80 (88%), Gaps = 1/80 (1%)
 Frame = +3

Query: 126 VGAFWGSRVMEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSELPPSQ 305
           +GAFWG+RVMEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKAC+E PPS+
Sbjct: 2   LGAFWGTRVMEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACAEPPPSK 61

Query: 306 KSSSHDA-GLANKDSAGSQS 362
            S+  DA G+A KD   +Q+
Sbjct: 62  TSALSDATGVAEKDGLSTQT 81


>ref|XP_002300133.1| predicted protein [Populus trichocarpa] gi|222847391|gb|EEE84938.1|
           predicted protein [Populus trichocarpa]
          Length = 82

 Score =  127 bits (318), Expect = 2e-27
 Identities = 61/82 (74%), Positives = 70/82 (85%)
 Frame = +3

Query: 117 MVGVGAFWGSRVMEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSELP 296
           MVG GAFWG+RVMEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACS+  
Sbjct: 1   MVGAGAFWGTRVMEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSQSQ 60

Query: 297 PSQKSSSHDAGLANKDSAGSQS 362
           PS+ S++  +G+  K+   + S
Sbjct: 61  PSKMSAAGASGVDEKEGLNTAS 82


>ref|XP_002264458.1| PREDICTED: uncharacterized protein LOC100264285 [Vitis vinifera]
          Length = 75

 Score =  118 bits (296), Expect = 7e-25
 Identities = 56/62 (90%), Positives = 59/62 (95%)
 Frame = +3

Query: 129 GAFWGSRVMEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSELPPSQK 308
           GAFWG+RVMEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLK CSE PPS+ 
Sbjct: 3   GAFWGTRVMEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKVCSEPPPSKT 62

Query: 309 SS 314
           S+
Sbjct: 63  SA 64


>ref|XP_004140549.1| PREDICTED: uncharacterized protein LOC101220585 [Cucumis sativus]
           gi|449519856|ref|XP_004166950.1| PREDICTED:
           uncharacterized protein LOC101231766 [Cucumis sativus]
          Length = 74

 Score =  114 bits (286), Expect = 1e-23
 Identities = 54/64 (84%), Positives = 58/64 (90%)
 Frame = +3

Query: 129 GAFWGSRVMEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSELPPSQK 308
           GAFWG+RV+EIVKKHDSGGLVWKRIKLTTTRKANAKKRL RVWQNEAVLKACSE PP + 
Sbjct: 3   GAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLHRVWQNEAVLKACSEPPPPKS 62

Query: 309 SSSH 320
           S  +
Sbjct: 63  SGDN 66


>gb|AFK38053.1| unknown [Lotus japonicus]
          Length = 78

 Score =  114 bits (284), Expect = 2e-23
 Identities = 58/71 (81%), Positives = 61/71 (85%), Gaps = 1/71 (1%)
 Frame = +3

Query: 129 GAFWGSRVMEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSELPPSQK 308
           GAFWG+RVMEIVKK DSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKA S+ PPS  
Sbjct: 3   GAFWGTRVMEIVKKRDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKATSQSPPSMS 62

Query: 309 SS-SHDAGLAN 338
           SS S D  + N
Sbjct: 63  SSFSADEAIDN 73


Top