BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032204
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   111   1e-22
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   110   2e-22
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...   107   1e-21
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   103   3e-20
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   102   5e-20

>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  111 bits (277), Expect = 1e-22
 Identities = 62/134 (46%), Positives = 79/134 (58%), Gaps = 7/134 (5%)
 Frame = +1

Query: 10  SSGDLLLVRRLWQPTIDNS-------YRTPGFEVFELDQFTCKWVRVNNLGGQALFLGDN 168
           S  +LLLV R    T D         YRT  F+V  LD    +W  V++LG +ALFLG+N
Sbjct: 259 SGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGEN 318

Query: 169 SSMSLPASDFPGCKPNCIYFTDDSFEAYSDPQDGPHDIGIFNLKHGSIEPHYQMESKTIF 348
            S+SL + DFPGCK NCIY+TDD  E   D   G  D+GIFNL+ GSIEP      +  +
Sbjct: 319 LSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGSIEPLPCSHFRIRW 378

Query: 349 PPPIWIEPTLQHPC 390
           PPP+W+ P   +PC
Sbjct: 379 PPPLWVTP---NPC 389


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  110 bits (275), Expect = 2e-22
 Identities = 62/134 (46%), Positives = 79/134 (58%), Gaps = 7/134 (5%)
 Frame = +1

Query: 10  SSGDLLLVRRLWQPTIDNS-------YRTPGFEVFELDQFTCKWVRVNNLGGQALFLGDN 168
           S  +LLLV R    T D         YRT  F+V  LD    +W  V++LG +ALFLG+N
Sbjct: 259 SGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGEN 318

Query: 169 SSMSLPASDFPGCKPNCIYFTDDSFEAYSDPQDGPHDIGIFNLKHGSIEPHYQMESKTIF 348
            S+SL + DFPGCK NCIY+TDD  E   D   G  D+GIFNL+ GSIEP      +  +
Sbjct: 319 LSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGSIEPLPCSHFRIRW 378

Query: 349 PPPIWIEPTLQHPC 390
           PPP+W+ P   +PC
Sbjct: 379 PPPLWVTP---NPC 389


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score =  107 bits (268), Expect = 1e-21
 Identities = 63/139 (45%), Positives = 83/139 (59%), Gaps = 12/139 (8%)
 Frame = +1

Query: 10  SSGD-LLLVRRLWQPTIDNS-------YRTPGFEVFELDQFTCKWVRVNNLGGQALFLGD 165
           S+GD LLL+R L Q   D++       YRT GFEVF+++     W RV  LG + LF+G 
Sbjct: 258 SAGDMLLLIRVLDQDFSDHAGEESDLVYRTVGFEVFKMNWGLLTWQRVETLGERVLFVGG 317

Query: 166 NSSMSLPASDFPGCKPNCIYFTDDSFEAYSDPQDGPHDIGIFNLKHGSIEP----HYQME 333
           NSS+S  ASDF GC  +CIYFTDD  E+  D   G HD+G+F L+  SIEP    +    
Sbjct: 318 NSSLSFCASDFVGCSADCIYFTDDYSESNDDDACGKHDLGVFRLRDKSIEPLPCFNQNSC 377

Query: 334 SKTIFPPPIWIEPTLQHPC 390
           S+  +P PIW+ P   +PC
Sbjct: 378 SRLRWPLPIWVSP---NPC 393


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score =  103 bits (256), Expect = 3e-20
 Identities = 53/112 (47%), Positives = 70/112 (62%), Gaps = 4/112 (3%)
 Frame = +1

Query: 67  YRTPGFEVFELDQFTCKWVRVNNLGGQALFLGDNSSMSLPASDFPGCKPNCIYFTDDSFE 246
           YRT  FEVF LD    +W+R++ LG +ALF+G+NSS+SL A+DF GC  NCIY+TDD  +
Sbjct: 290 YRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLD 349

Query: 247 AYSDPQDGPHDIGIFNLKHGSIEP----HYQMESKTIFPPPIWIEPTLQHPC 390
           A  D   G HD+GIF L   +IEP         S   + PP+W+ P   +PC
Sbjct: 350 ANYDGHFGDHDLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLWVSP---NPC 398


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  102 bits (255), Expect = 5e-20
 Identities = 61/135 (45%), Positives = 78/135 (57%), Gaps = 8/135 (5%)
 Frame = +1

Query: 10  SSGD-LLLVRRLWQPTIDNS---YRTPGFEVFELDQFTCKWVRVNNLGGQALFLGDNSSM 177
           SSGD LLLV R     ++     Y+T  FEVF+LD    +W RV +LG   LF+G+NSS+
Sbjct: 262 SSGDGLLLVTRYLDLDVEFDIFIYKTARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSL 321

Query: 178 SLPASDFPGCKPNCIYFTDDSFEAYSDPQDGPHDIGIFNLKHGSIEP----HYQMESKTI 345
           +L AS   GC  +CIY+TDD      D   G HD+GIF L  GSIEP         S+  
Sbjct: 322 ALSASGLSGCMGDCIYYTDDYSANNYDGHIGEHDLGIFKLSDGSIEPLPCYPRNSYSRLQ 381

Query: 346 FPPPIWIEPTLQHPC 390
           +PPP+WI P   +PC
Sbjct: 382 WPPPLWISP---NPC 393