BLASTX nr result

ID: Cimicifuga21_contig00032185 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032185
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324486.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_002526213.1| r2r3-myb transcription factor, putative [Ric...   103   2e-20
emb|CBI17787.3| unnamed protein product [Vitis vinifera]               91   7e-17
ref|XP_002270766.1| PREDICTED: uncharacterized protein LOC100256...    91   7e-17
emb|CAN82457.1| hypothetical protein VITISV_010029 [Vitis vinifera]    91   7e-17

>ref|XP_002324486.1| predicted protein [Populus trichocarpa] gi|222865920|gb|EEF03051.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  107 bits (266), Expect = 1e-21
 Identities = 54/141 (38%), Positives = 85/141 (60%), Gaps = 1/141 (0%)
 Frame = -3

Query: 423 PATHLGNFQE-EKFNELLTSSIGQRTNSTISNAKQDEVENSIKGFSSSENSTEFNTGLNS 247
           P+T  G+ Q+ + + +L+     Q+ +   SN+    +ENS+   +SS++   F  G N 
Sbjct: 206 PSTQQGDAQKVDIYGQLVDPDTLQQGHPKFSNSNVVSLENSMNVITSSDSPLPFTNGKNV 265

Query: 246 MEASIMSKPVGVEQFNMNYQSVSNLQAELGDLLYNKTGGFNANGDQVNEFDCFKEMDGAK 67
           M+ +I+ +    +Q +   Q VSN Q+EL + L NKT GF A GDQ+ EFDCFKEM+G++
Sbjct: 266 MDLTIVPRAGMADQSDAAVQPVSNFQSELENFLNNKTSGFTAQGDQIGEFDCFKEMNGSR 325

Query: 66  ESMIWWANSFDTXXXXXXSWD 4
           ++M WW+N F+T      SWD
Sbjct: 326 DNMNWWSNDFETKSASSNSWD 346


>ref|XP_002526213.1| r2r3-myb transcription factor, putative [Ricinus communis]
           gi|223534452|gb|EEF36154.1| r2r3-myb transcription
           factor, putative [Ricinus communis]
          Length = 417

 Score =  103 bits (256), Expect = 2e-20
 Identities = 59/145 (40%), Positives = 82/145 (56%), Gaps = 4/145 (2%)
 Frame = -3

Query: 426 VPATHLGNFQEEKFNELLTSSIGQRTNS--TISNAKQDEVENSIKGFSSSENSTEFNTGL 253
           +P    G+ Q+    E L+ SI     +     N K D +ENS    +SS++S  FN G 
Sbjct: 253 LPTPQQGHEQKLDIYEQLSGSIALENQNYPRFDNPKVDGLENSFNAITSSDSSVPFNNG- 311

Query: 252 NSMEASIM--SKPVGVEQFNMNYQSVSNLQAELGDLLYNKTGGFNANGDQVNEFDCFKEM 79
           NS+  SI    +  GV+Q     Q VS  QAEL + L NKT GF +  DQ+ EFDCF+EM
Sbjct: 312 NSVADSIAMEGRANGVDQSVAAIQPVSTFQAELENFLSNKTSGFVSQEDQITEFDCFREM 371

Query: 78  DGAKESMIWWANSFDTXXXXXXSWD 4
           +G+K+S++WW+N F+T      SWD
Sbjct: 372 NGSKDSLVWWSNDFETKSASSNSWD 396


>emb|CBI17787.3| unnamed protein product [Vitis vinifera]
          Length = 365

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 57/137 (41%), Positives = 78/137 (56%), Gaps = 1/137 (0%)
 Frame = -3

Query: 411 LGNFQEEKFNELLTSSIG-QRTNSTISNAKQDEVENSIKGFSSSENSTEFNTGLNSMEAS 235
           +G  Q+  F E  T+SI  Q+     +N K DE E S+    SS++S  +N+  N + A 
Sbjct: 215 MGQEQKSGFYEPPTASITLQQEYPKTNNPKGDEFEKSLNVLPSSDSSMAYNSE-NMVGAP 273

Query: 234 IMSKPVGVEQFNMNYQSVSNLQAELGDLLYNKTGGFNANGDQVNEFDCFKEMDGAKESMI 55
           IMSKP GV+Q N+  Q+VS  QAEL D L NK  GF    +Q+       E+DG+K+S+ 
Sbjct: 274 IMSKPDGVDQSNIAQQAVSTFQAELDDFLNNKMVGFLPQEEQMT------EIDGSKDSLA 327

Query: 54  WWANSFDTXXXXXXSWD 4
           WW+N FDT      SWD
Sbjct: 328 WWSNDFDTKSASSHSWD 344


>ref|XP_002270766.1| PREDICTED: uncharacterized protein LOC100256441 [Vitis vinifera]
          Length = 364

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 57/137 (41%), Positives = 78/137 (56%), Gaps = 1/137 (0%)
 Frame = -3

Query: 411 LGNFQEEKFNELLTSSIG-QRTNSTISNAKQDEVENSIKGFSSSENSTEFNTGLNSMEAS 235
           +G  Q+  F E  T+SI  Q+     +N K DE E S+    SS++S  +N+  N + A 
Sbjct: 214 MGQEQKSGFYEPPTASITLQQEYPKTNNPKGDEFEKSLNVLPSSDSSMAYNSE-NMVGAP 272

Query: 234 IMSKPVGVEQFNMNYQSVSNLQAELGDLLYNKTGGFNANGDQVNEFDCFKEMDGAKESMI 55
           IMSKP GV+Q N+  Q+VS  QAEL D L NK  GF    +Q+       E+DG+K+S+ 
Sbjct: 273 IMSKPDGVDQSNIAQQAVSTFQAELDDFLNNKMVGFLPQEEQMT------EIDGSKDSLA 326

Query: 54  WWANSFDTXXXXXXSWD 4
           WW+N FDT      SWD
Sbjct: 327 WWSNDFDTKSASSHSWD 343


>emb|CAN82457.1| hypothetical protein VITISV_010029 [Vitis vinifera]
          Length = 336

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 56/137 (40%), Positives = 79/137 (57%), Gaps = 1/137 (0%)
 Frame = -3

Query: 411 LGNFQEEKFNELLTSSIG-QRTNSTISNAKQDEVENSIKGFSSSENSTEFNTGLNSMEAS 235
           +G  Q+  F E  T+SI  Q+ +  I+N K DE + S+    SS++S  +N+  N + A 
Sbjct: 165 MGQEQKSGFYEPPTASITLQQEHPKINNPKGDEFDKSLNVLPSSDSSMAYNSE-NMVGAP 223

Query: 234 IMSKPVGVEQFNMNYQSVSNLQAELGDLLYNKTGGFNANGDQVNEFDCFKEMDGAKESMI 55
           IMSKP GV+Q N+  Q+VS  QAEL D L NK  GF    +Q+       E+ G+K+S+ 
Sbjct: 224 IMSKPDGVDQSNIGQQAVSTFQAELDDFLNNKMDGFLPQEEQMT------EIYGSKDSLA 277

Query: 54  WWANSFDTXXXXXXSWD 4
           WW+N FDT      SWD
Sbjct: 278 WWSNDFDTKSASSHSWD 294


Top