BLASTX nr result

ID: Cimicifuga21_contig00032184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032184
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP...    80   1e-13
emb|CBI15349.3| unnamed protein product [Vitis vinifera]               80   1e-13
ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putativ...    66   3e-09
ref|XP_004168162.1| PREDICTED: putative ATP-dependent helicase H...    63   3e-08
ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP...    62   5e-08

>ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
           HRQ1-like [Vitis vinifera]
          Length = 1231

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 43/89 (48%), Positives = 59/89 (66%)
 Frame = +3

Query: 12  RKSGNGTKVLSSLEDLLVVTKDNDTATRCGEAKRARTNGFVTSSSQSKQTRCRDMKPLLP 191
           RK+GN   +L SLEDLL+  K+       G+AK+AR +    SS+ S Q++C D  PLLP
Sbjct: 378 RKNGNEMAMLFSLEDLLISVKEGGA----GKAKQARRSWSAVSSTNSAQSKCHDTNPLLP 433

Query: 192 AEMVEHLKRGIGYREQIVHVEDIGYREQI 278
            EMVEHL++G+G + Q+VHVE+I  R  I
Sbjct: 434 MEMVEHLRKGMGCQGQMVHVEEICARMAI 462


>emb|CBI15349.3| unnamed protein product [Vitis vinifera]
          Length = 1188

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 43/89 (48%), Positives = 59/89 (66%)
 Frame = +3

Query: 12  RKSGNGTKVLSSLEDLLVVTKDNDTATRCGEAKRARTNGFVTSSSQSKQTRCRDMKPLLP 191
           RK+GN   +L SLEDLL+  K+       G+AK+AR +    SS+ S Q++C D  PLLP
Sbjct: 318 RKNGNEMAMLFSLEDLLISVKEGGA----GKAKQARRSWSAVSSTNSAQSKCHDTNPLLP 373

Query: 192 AEMVEHLKRGIGYREQIVHVEDIGYREQI 278
            EMVEHL++G+G + Q+VHVE+I  R  I
Sbjct: 374 MEMVEHLRKGMGCQGQMVHVEEICARMAI 402


>ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223546212|gb|EEF47714.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 1189

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 37/88 (42%), Positives = 48/88 (54%)
 Frame = +3

Query: 15  KSGNGTKVLSSLEDLLVVTKDNDTATRCGEAKRARTNGFVTSSSQSKQTRCRDMKPLLPA 194
           KSGN   +L SLEDLL   K    + +  EAKR        S   S +T C +   L+P 
Sbjct: 336 KSGNAIAMLFSLEDLLNFVKGGGVSEKGNEAKRESGRLSSISRPYSFRTHCHETNHLVPV 395

Query: 195 EMVEHLKRGIGYREQIVHVEDIGYREQI 278
           EMV+HL+ G+G    +VHVEDI  R+ I
Sbjct: 396 EMVQHLREGLGSNGHMVHVEDIDARKAI 423


>ref|XP_004168162.1| PREDICTED: putative ATP-dependent helicase HRQ1-like, partial
           [Cucumis sativus]
          Length = 489

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 38/86 (44%), Positives = 48/86 (55%)
 Frame = +3

Query: 3   MGKRKSGNGTKVLSSLEDLLVVTKDNDTATRCGEAKRARTNGFVTSSSQSKQTRCRDMKP 182
           M K  SG    V  SLE L+     N+T     E KRA+ +   +SSSQS + RC D   
Sbjct: 373 MLKHGSGREMCVPFSLEALIT---SNETDVDGSETKRAKKSDTASSSSQSDRIRCHDTLK 429

Query: 183 LLPAEMVEHLKRGIGYREQIVHVEDI 260
           LLP +MVEHL + +G   QIVH+ DI
Sbjct: 430 LLPEDMVEHLGKSVGPEGQIVHINDI 455


>ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
           HRQ1-like [Cucumis sativus]
          Length = 1218

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 38/86 (44%), Positives = 47/86 (54%)
 Frame = +3

Query: 3   MGKRKSGNGTKVLSSLEDLLVVTKDNDTATRCGEAKRARTNGFVTSSSQSKQTRCRDMKP 182
           M K  SG    V  SLE    V   N+T     E KRA+ +   +SSSQS + RC D   
Sbjct: 373 MLKHGSGREMCVPFSLE---AVITSNETDVDGSETKRAKKSDTASSSSQSDRIRCHDTLK 429

Query: 183 LLPAEMVEHLKRGIGYREQIVHVEDI 260
           LLP +MVEHL + +G   QIVH+ DI
Sbjct: 430 LLPEDMVEHLGKSVGPEGQIVHINDI 455


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