BLASTX nr result

ID: Cimicifuga21_contig00032170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032170
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]            69   3e-10
emb|CAN74178.1| hypothetical protein VITISV_029257 [Vitis vinifera]    69   4e-10
emb|CAN77158.1| hypothetical protein VITISV_019025 [Vitis vinifera]    62   5e-08
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]    60   2e-07
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]          59   4e-07

>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 35/70 (50%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
 Frame = -3

Query: 254  YSLYFDGGEL*YYQETIEDSYKE-WLKFMQEEINSLHENKTFKLVEKHQGKKIL*KKWIY 78
            Y L  DGGE   ++E I+D +KE W++ MQ+EI SLHENKTF+LV+  +GK+ L  KW++
Sbjct: 803  YVLLTDGGEPDSFEEAIDDEHKEKWIEAMQDEIKSLHENKTFELVKLPKGKRALKNKWVF 862

Query: 77   KSRMRKATHN 48
            K  M+   HN
Sbjct: 863  K--MKHDEHN 870


>emb|CAN74178.1| hypothetical protein VITISV_029257 [Vitis vinifera]
          Length = 623

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
 Frame = -3

Query: 263 SNMYSLYFDGGEL*YYQETI-EDSYKEWLKFMQEEINSLHENKTFKLVEKHQGKKIL*KK 87
           SN Y L FDGGE   YQE +  D  KEWL+ M EEI SLH+N TF+L+E  +GK+ L  K
Sbjct: 346 SNEYLLLFDGGEPENYQEVLLYDEKKEWLRAMHEEIKSLHKNNTFELMELPKGKRTLKNK 405

Query: 86  WIYKSR 69
           W+ K +
Sbjct: 406 WVLKRK 411


>emb|CAN77158.1| hypothetical protein VITISV_019025 [Vitis vinifera]
          Length = 788

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
 Frame = -3

Query: 263 SNMYSLYFDGGEL*YYQETI-EDSYKEWLKFMQEEINSLHENKTFKLVEKHQGKKIL*KK 87
           S+ Y L+ +GGE   YQE +  D  KEWL+ M EE+ S H+N T++L+E  +GK+ L  K
Sbjct: 453 SDEYLLFSBGGESXNYQEVLLHDEKKEWLRAMHEEMKSFHKNNTYELMELPKGKRALKNK 512

Query: 86  WIYKSR 69
           W+ K +
Sbjct: 513 WVLKRK 518


>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
          Length = 1207

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
 Frame = -3

Query: 254 YSLYFDGGEL*YYQETIEDSYK-EWLKFMQEEINSLHENKTFKLVEKHQGKKIL*KKWIY 78
           Y L  DGGE   Y E +ED  K +W+  MQ+E+ SLHEN +F+LV+  +GK+ L  +W+Y
Sbjct: 701 YVLLIDGGEPESYVEAMEDENKMKWVDAMQDEMESLHENHSFELVKLPKGKRALKNRWVY 760

Query: 77  KSRMRKAT 54
           + +  + T
Sbjct: 761 RVKQEEHT 768


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
 Frame = -3

Query: 260  NMYSLYFDGGEL*YYQETIE-DSYKEWLKFMQEEINSLHENKTFKLVEKHQGKKIL*KKW 84
            + Y L  DGGE   Y+E +E D  ++W + MQEE+NSL+ N TF+LV+  + +K L  +W
Sbjct: 798  SQYVLLTDGGEPESYEEAMESDQKRQWFEAMQEEMNSLYVNDTFELVKAPKNRKALKNRW 857

Query: 83   IYKSRMRKAT 54
            +Y+ +  + T
Sbjct: 858  VYRVKHEEGT 867


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