BLASTX nr result

ID: Cimicifuga21_contig00032150 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032150
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264761.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   122   3e-26
ref|XP_002264927.2| PREDICTED: E3 ubiquitin-protein ligase PUB23...   119   3e-25
ref|XP_004155855.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   114   1e-23
ref|XP_004134357.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   114   1e-23
gb|ABK25393.1| unknown [Picea sitchensis]                              94   1e-17

>ref|XP_002264761.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Vitis vinifera]
          Length = 411

 Score =  122 bits (306), Expect = 3e-26
 Identities = 61/79 (77%), Positives = 72/79 (91%)
 Frame = +2

Query: 5   KASSCALDVLIEILRASKKNRLKGIEAGAMCTLIELLPVSNKSKCERMLLLIKLLCECAE 184
           KAS+ AL++LIEIL +SKK+RLK IEAGA+C LIELLP SN+SKCE+MLLL+KLLCECAE
Sbjct: 245 KASASALELLIEILGSSKKSRLKAIEAGAVCILIELLPDSNRSKCEKMLLLLKLLCECAE 304

Query: 185 GRLALVDHSLGIVAISKKI 241
           GRLALV+H LGI AISKK+
Sbjct: 305 GRLALVEHGLGIAAISKKL 323


>ref|XP_002264927.2| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Vitis vinifera]
          Length = 413

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/79 (75%), Positives = 71/79 (89%)
 Frame = +2

Query: 5   KASSCALDVLIEILRASKKNRLKGIEAGAMCTLIELLPVSNKSKCERMLLLIKLLCECAE 184
           KAS+ AL++LIEIL +SK +RLK IEAGA+C LIELLP SN+SKCE+MLLL+KLLCECAE
Sbjct: 247 KASASALELLIEILGSSKTSRLKVIEAGAVCILIELLPDSNRSKCEKMLLLLKLLCECAE 306

Query: 185 GRLALVDHSLGIVAISKKI 241
           GRLALV+H LGI AISKK+
Sbjct: 307 GRLALVEHGLGIAAISKKL 325


>ref|XP_004155855.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Cucumis sativus]
          Length = 365

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/79 (69%), Positives = 69/79 (87%)
 Frame = +2

Query: 5   KASSCALDVLIEILRASKKNRLKGIEAGAMCTLIELLPVSNKSKCERMLLLIKLLCECAE 184
           KASSCALDV+IEIL +SK++R+K IEAGA+  LIELLP S +SKCERML +++ LCECAE
Sbjct: 193 KASSCALDVMIEILSSSKRSRVKAIEAGAVWILIELLPESGRSKCERMLQILQSLCECAE 252

Query: 185 GRLALVDHSLGIVAISKKI 241
           GRLALV+H +GI A++KKI
Sbjct: 253 GRLALVEHGMGIAAVTKKI 271


>ref|XP_004134357.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Cucumis sativus]
          Length = 415

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/79 (69%), Positives = 69/79 (87%)
 Frame = +2

Query: 5   KASSCALDVLIEILRASKKNRLKGIEAGAMCTLIELLPVSNKSKCERMLLLIKLLCECAE 184
           KASSCALDV+IEIL +SK++R+K IEAGA+  LIELLP S +SKCERML +++ LCECAE
Sbjct: 243 KASSCALDVMIEILSSSKRSRVKAIEAGAVWILIELLPESGRSKCERMLQILQSLCECAE 302

Query: 185 GRLALVDHSLGIVAISKKI 241
           GRLALV+H +GI A++KKI
Sbjct: 303 GRLALVEHGMGIAAVTKKI 321


>gb|ABK25393.1| unknown [Picea sitchensis]
          Length = 417

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 43/79 (54%), Positives = 61/79 (77%)
 Frame = +2

Query: 5   KASSCALDVLIEILRASKKNRLKGIEAGAMCTLIELLPVSNKSKCERMLLLIKLLCECAE 184
           +A++ +L++L+ I   S+KNR+K IEAGA+  LIELLP S +  CE+ML L+ +LCECAE
Sbjct: 255 QATTSSLEILMAICSPSRKNRIKAIEAGAIYILIELLPESQRMNCEKMLCLLDILCECAE 314

Query: 185 GRLALVDHSLGIVAISKKI 241
           GR   +DH++GI +ISKKI
Sbjct: 315 GRATTIDHAMGIASISKKI 333


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