BLASTX nr result

ID: Cimicifuga21_contig00032142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032142
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317225.1| predicted protein [Populus trichocarpa] gi|2...   154   9e-36
emb|CAN77674.1| hypothetical protein VITISV_013720 [Vitis vinifera]   154   9e-36
emb|CBI36071.3| unnamed protein product [Vitis vinifera]              152   2e-35
ref|XP_002278331.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   152   2e-35
ref|XP_003627031.1| 1-aminocyclopropane-1-carboxylate oxidase [M...   133   2e-29

>ref|XP_002317225.1| predicted protein [Populus trichocarpa] gi|222860290|gb|EEE97837.1|
           predicted protein [Populus trichocarpa]
          Length = 373

 Score =  154 bits (388), Expect = 9e-36
 Identities = 72/135 (53%), Positives = 97/135 (71%)
 Frame = -1

Query: 407 VLSILLEHAPVASTKLNNILDKQEIHSLVCYLHKHHKYTSVSRCDGSLKSDFIRMLIRGS 228
           +L +L E+ P  S   N+++ +Q++   VC L+KH +     R    L  D   MLIRG+
Sbjct: 196 ILQVLQENCPRKSKYANDMMQRQDLIGPVCCLYKHRRDIPADRLASYLGYDVFSMLIRGT 255

Query: 227 ADYSHALCVHVCDDSSEFHVYSKKGWISFTPNRNAIVMTIGHQIQAWSDGHYKNVIGRPI 48
            DYSHALC+H+CD SS+FHVYSKKGW+SF P+++A+++T+G Q QAWS G YK V+GRPI
Sbjct: 256 -DYSHALCLHLCDASSQFHVYSKKGWVSFCPDKDALIVTVGDQTQAWSGGQYKQVLGRPI 314

Query: 47  FKVEDEEPISMAFLY 3
           FK EDE+ ISMAFLY
Sbjct: 315 FKGEDEDNISMAFLY 329


>emb|CAN77674.1| hypothetical protein VITISV_013720 [Vitis vinifera]
          Length = 373

 Score =  154 bits (388), Expect = 9e-36
 Identities = 77/136 (56%), Positives = 105/136 (77%), Gaps = 1/136 (0%)
 Frame = -1

Query: 407 VLSILLEHAPVASTKLNNILDKQEIHSLVCYLHKHHKYTSVSRCDGSLKSDFIRMLIRGS 228
           +L IL E++   S   N ++ +QE+   +C+L+KH+K  S  R  GSL+ D IRMLIRG 
Sbjct: 195 ILLILKENSLKNSKFGNEMIPEQEVIGTICHLYKHYKTASSDRWAGSLRYDVIRMLIRGF 254

Query: 227 ADYSHALCVHVCDDSSEFHVYSKKGWISFTPNRNAIVMTIGHQIQAWSDGHYKNVIGRPI 48
            D SH+LC+HVC++SSEFH+YSKKGWISF P+++A+++TIG Q+QAWS G YK+VIGRPI
Sbjct: 255 -DCSHSLCLHVCNESSEFHIYSKKGWISFCPDKDALLVTIGDQMQAWSGGQYKHVIGRPI 313

Query: 47  FKVED-EEPISMAFLY 3
           FK E+ ++ ISMAFLY
Sbjct: 314 FKGENHKDGISMAFLY 329


>emb|CBI36071.3| unnamed protein product [Vitis vinifera]
          Length = 225

 Score =  152 bits (385), Expect = 2e-35
 Identities = 77/136 (56%), Positives = 104/136 (76%), Gaps = 1/136 (0%)
 Frame = -1

Query: 407 VLSILLEHAPVASTKLNNILDKQEIHSLVCYLHKHHKYTSVSRCDGSLKSDFIRMLIRGS 228
           +L IL E +   S   N ++ +QE+   +C+L+KH+K  S  R  GSL+ D IRMLIRG 
Sbjct: 47  ILLILKETSLKNSKFGNEMIPEQEVIGTICHLYKHYKTASSDRWAGSLRYDVIRMLIRGF 106

Query: 227 ADYSHALCVHVCDDSSEFHVYSKKGWISFTPNRNAIVMTIGHQIQAWSDGHYKNVIGRPI 48
            D SH+LC+HVC++SSEFH+YSKKGWISF P+++A+++TIG Q+QAWS G YK+VIGRPI
Sbjct: 107 -DCSHSLCLHVCNESSEFHIYSKKGWISFCPDKDALLVTIGDQMQAWSGGQYKHVIGRPI 165

Query: 47  FKVED-EEPISMAFLY 3
           FK E+ ++ ISMAFLY
Sbjct: 166 FKGENHKDGISMAFLY 181


>ref|XP_002278331.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase [Vitis
           vinifera]
          Length = 373

 Score =  152 bits (385), Expect = 2e-35
 Identities = 77/136 (56%), Positives = 104/136 (76%), Gaps = 1/136 (0%)
 Frame = -1

Query: 407 VLSILLEHAPVASTKLNNILDKQEIHSLVCYLHKHHKYTSVSRCDGSLKSDFIRMLIRGS 228
           +L IL E +   S   N ++ +QE+   +C+L+KH+K  S  R  GSL+ D IRMLIRG 
Sbjct: 195 ILLILKETSLKNSKFGNEMIPEQEVIGTICHLYKHYKTASSDRWAGSLRYDVIRMLIRGF 254

Query: 227 ADYSHALCVHVCDDSSEFHVYSKKGWISFTPNRNAIVMTIGHQIQAWSDGHYKNVIGRPI 48
            D SH+LC+HVC++SSEFH+YSKKGWISF P+++A+++TIG Q+QAWS G YK+VIGRPI
Sbjct: 255 -DCSHSLCLHVCNESSEFHIYSKKGWISFCPDKDALLVTIGDQMQAWSGGQYKHVIGRPI 313

Query: 47  FKVED-EEPISMAFLY 3
           FK E+ ++ ISMAFLY
Sbjct: 314 FKGENHKDGISMAFLY 329


>ref|XP_003627031.1| 1-aminocyclopropane-1-carboxylate oxidase [Medicago truncatula]
           gi|355521053|gb|AET01507.1|
           1-aminocyclopropane-1-carboxylate oxidase [Medicago
           truncatula]
          Length = 369

 Score =  133 bits (334), Expect = 2e-29
 Identities = 70/138 (50%), Positives = 95/138 (68%), Gaps = 3/138 (2%)
 Frame = -1

Query: 407 VLSILLEHAPVASTKLNNILDKQEIHSLVCYLHKHHKYTSVSRCD---GSLKSDFIRMLI 237
           +L+I+L++         +I+        +C ++KHH+   ++R D    SLK D IRMLI
Sbjct: 193 ILAIILKNVTKKLASDGDIIGHGNEVGTLCCIYKHHQ--DINRNDHWVDSLKYDVIRMLI 250

Query: 236 RGSADYSHALCVHVCDDSSEFHVYSKKGWISFTPNRNAIVMTIGHQIQAWSDGHYKNVIG 57
           RG+ DYSH+LC+HVCD SSEFHVYSKK W++F P + A+V+T G QIQ  S GHYK+VIG
Sbjct: 251 RGT-DYSHSLCLHVCDGSSEFHVYSKKSWLTFCPEQGALVITAGDQIQVLSGGHYKDVIG 309

Query: 56  RPIFKVEDEEPISMAFLY 3
           + IFK + E+ ISMAFLY
Sbjct: 310 KAIFKGKREDNISMAFLY 327


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