BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032128
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]   107   1e-21
ref|XP_002528570.1| pentatricopeptide repeat-containing protein,...    98   6e-19
ref|XP_002301973.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
ref|XP_002890375.1| pentatricopeptide repeat-containing protein ...    89   4e-16

>ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/71 (74%), Positives = 56/71 (78%)
 Frame = -2

Query: 239 MHLQGFKPDGTTISSVLPIVGDLEDLKMGIQIHGYVLKQGLEPDKCVVSALIDMYGKCRR 60
           MHL+GF+PDGTTISSVLP VGDLEDL MGI IHGYV+KQGL  DKCV SALIDMYGKC  
Sbjct: 241 MHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSC 300

Query: 59  QEFAKLVFDSM 27
                 VFD M
Sbjct: 301 TSEMSQVFDQM 311



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/81 (38%), Positives = 48/81 (59%)
 Frame = -2

Query: 245 QKMHLQGFKPDGTTISSVLPIVGDLEDLKMGIQIHGYVLKQGLEPDKCVVSALIDMYGKC 66
           ++M + G KP+  TI  +LP  G++  L  G   H + L++G+  D  V SALIDMY KC
Sbjct: 375 REMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKC 434

Query: 65  RRQEFAKLVFDSMVEKCVVAW 3
            R + +++ FD +  K +V W
Sbjct: 435 GRIQASRICFDGIPTKNLVCW 455


>emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
          Length = 760

 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/71 (74%), Positives = 56/71 (78%)
 Frame = -2

Query: 239 MHLQGFKPDGTTISSVLPIVGDLEDLKMGIQIHGYVLKQGLEPDKCVVSALIDMYGKCRR 60
           MHL+GF+PDGTTISSVLP VGDLEDL MGI IHGYV+KQGL  DKCV SALIDMYGKC  
Sbjct: 241 MHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSC 300

Query: 59  QEFAKLVFDSM 27
                 VFD M
Sbjct: 301 TSEMSQVFDQM 311



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/81 (38%), Positives = 48/81 (59%)
 Frame = -2

Query: 245 QKMHLQGFKPDGTTISSVLPIVGDLEDLKMGIQIHGYVLKQGLEPDKCVVSALIDMYGKC 66
           ++M + G KP+  TI  +LP  G++  L  G   H + L++G+  D  V SALIDMY KC
Sbjct: 375 REMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKC 434

Query: 65  RRQEFAKLVFDSMVEKCVVAW 3
            R + +++ FD +  K +V W
Sbjct: 435 GRIQASRICFDGIPTKNLVCW 455


>ref|XP_002528570.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532014|gb|EEF33825.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 542

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 50/73 (68%), Positives = 54/73 (73%)
 Frame = -2

Query: 245 QKMHLQGFKPDGTTISSVLPIVGDLEDLKMGIQIHGYVLKQGLEPDKCVVSALIDMYGKC 66
           Q MH + FKPDGT+ISSVL  VGDL+ L MG QIHGYV+KQGL  DKCVVSALIDMYGKC
Sbjct: 228 QNMHCEEFKPDGTSISSVLSAVGDLKMLDMGFQIHGYVIKQGLCQDKCVVSALIDMYGKC 287

Query: 65  RRQEFAKLVFDSM 27
                   VFD M
Sbjct: 288 ACTMKISEVFDEM 300



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/81 (38%), Positives = 47/81 (58%)
 Frame = -2

Query: 245 QKMHLQGFKPDGTTISSVLPIVGDLEDLKMGIQIHGYVLKQGLEPDKCVVSALIDMYGKC 66
           ++M + G KP+  TI  +LP  G++  L  G   H + LK G+  +  V SAL+DMY KC
Sbjct: 364 REMQVVGVKPNAVTIPCLLPACGNIAALMHGKAAHCFSLKSGISSNVYVGSALVDMYAKC 423

Query: 65  RRQEFAKLVFDSMVEKCVVAW 3
            R   ++L FD M  + +V+W
Sbjct: 424 GRIHISRLCFDIMPTRNLVSW 444


>ref|XP_002301973.1| predicted protein [Populus trichocarpa] gi|222843699|gb|EEE81246.1|
           predicted protein [Populus trichocarpa]
          Length = 716

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 50/75 (66%), Positives = 56/75 (74%)
 Frame = -2

Query: 245 QKMHLQGFKPDGTTISSVLPIVGDLEDLKMGIQIHGYVLKQGLEPDKCVVSALIDMYGKC 66
           Q MHL+G KPDGT++SSVLP VGDL+   MGIQIH YV+KQGL PDK VVSALIDMYGKC
Sbjct: 199 QNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKC 258

Query: 65  RRQEFAKLVFDSMVE 21
                   VF+ M E
Sbjct: 259 ACASEMSGVFNEMDE 273



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/81 (39%), Positives = 48/81 (59%)
 Frame = -2

Query: 245 QKMHLQGFKPDGTTISSVLPIVGDLEDLKMGIQIHGYVLKQGLEPDKCVVSALIDMYGKC 66
           ++M ++G KP+  TI  +LP  G++  L  G   H + L+ G+  D  V SALIDMY KC
Sbjct: 333 REMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKC 392

Query: 65  RRQEFAKLVFDSMVEKCVVAW 3
            R   ++L FD M  + +V+W
Sbjct: 393 GRMLASRLCFDMMPNRNLVSW 413


>ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297336217|gb|EFH66634.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 760

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/59 (71%), Positives = 48/59 (81%)
 Frame = -2

Query: 245 QKMHLQGFKPDGTTISSVLPIVGDLEDLKMGIQIHGYVLKQGLEPDKCVVSALIDMYGK 69
           QKMH  GF PD  T+SSVLP VGD E+L MG QIHGYV+KQGL  DKCV+SA++DMYGK
Sbjct: 241 QKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGK 299



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/81 (40%), Positives = 49/81 (60%)
 Frame = -2

Query: 245 QKMHLQGFKPDGTTISSVLPIVGDLEDLKMGIQIHGYVLKQGLEPDKCVVSALIDMYGKC 66
           ++M + G KP+  TI S+LP  G++  L  G   HG+ ++  L  D  V SALIDMY KC
Sbjct: 377 REMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKC 436

Query: 65  RRQEFAKLVFDSMVEKCVVAW 3
            R + +++VF+ M  K +V W
Sbjct: 437 GRIKMSQIVFNMMPTKNLVCW 457