BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032116
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containi...   238   3e-61
emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera]   238   3e-61
ref|XP_002315827.1| predicted protein [Populus trichocarpa] gi|2...   230   1e-58
ref|XP_004138939.1| PREDICTED: pentatricopeptide repeat-containi...   220   1e-55
ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containi...   218   4e-55

>ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like [Vitis vinifera]
          Length = 709

 Score =  238 bits (608), Expect = 3e-61
 Identities = 112/140 (80%), Positives = 127/140 (90%)
 Frame = -1

Query: 422 VKTQPEINAFNLLLDSLCKCSLVEEAEAMFVKAKSKVNPDANTYNILFFGWCRVRNPIRG 243
           VKTQPEINA NLLLD+LCKCSLVE+A+AMF + K+KV PDANTYNILFFGWCRVRNP RG
Sbjct: 369 VKTQPEINALNLLLDALCKCSLVEDAQAMFRRVKNKVKPDANTYNILFFGWCRVRNPSRG 428

Query: 242 MKVLEEMIERGHTPENFTYNTAIDAFCRSGMVSEAVALFEFMRTRGSTMSSPTAKTYTIM 63
           M+VLEEMIE GHTP++FTYNTAID+FC++GMV+EA  LFEFMRT+GSTMSSPTAKTY IM
Sbjct: 429 MRVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIM 488

Query: 62  IVALAQCDRMEECFKFIEDM 3
           I+AL Q DR EECFK I+DM
Sbjct: 489 ILALVQSDRTEECFKLIKDM 508



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 4/132 (3%)
 Frame = -1

Query: 410 PEINAFNLLLDSLCKCSLVEEAEAMF----VKAKSKVNPDANTYNILFFGWCRVRNPIRG 243
           P+   +N  +DS CK  +V EA  +F     K  +  +P A TY I+     +       
Sbjct: 442 PDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEEC 501

Query: 242 MKVLEEMIERGHTPENFTYNTAIDAFCRSGMVSEAVALFEFMRTRGSTMSSPTAKTYTIM 63
            K++++MI  G  P+  TY   I+  C +G V EA   ++F+   G+    P   TY   
Sbjct: 502 FKLIKDMINSGVLPDVSTYKQVIEGMCLAGKVEEA---YKFLEEMGNKGYRPDIVTYNCF 558

Query: 62  IVALAQCDRMEE 27
           +  L +  + EE
Sbjct: 559 LDVLCENKKSEE 570



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 2/132 (1%)
 Frame = -1

Query: 410 PEINAFNLLLDSLCKCSLVEEAEAMFVKAKSK-VNPDANTYNILFFGWCRVRNPIRGMKV 234
           P+++ +  +++ +C    VEEA     +  +K   PD  TYN      C  +     + +
Sbjct: 515 PDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENKKSEEALGL 574

Query: 233 LEEMIERGHTPENFTYNTAIDAFCRSGMVSEAVALFEFMRTRGSTMSSPTAKTYTIMIVA 54
              MIE G  P   T+N  I  F   G    A   +  M  RG    +    TY +MI  
Sbjct: 575 YGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDT---DTYCVMIEG 631

Query: 53  LAQCDRMEE-CF 21
           L  C++ME+ CF
Sbjct: 632 LFNCNKMEDACF 643


>emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera]
          Length = 708

 Score =  238 bits (608), Expect = 3e-61
 Identities = 112/140 (80%), Positives = 127/140 (90%)
 Frame = -1

Query: 422 VKTQPEINAFNLLLDSLCKCSLVEEAEAMFVKAKSKVNPDANTYNILFFGWCRVRNPIRG 243
           VKTQPEINA NLLLD+LCKCSLVE+A+AMF + K+KV PDANTYNILFFGWCRVRNP RG
Sbjct: 342 VKTQPEINALNLLLDALCKCSLVEDAQAMFRRVKNKVKPDANTYNILFFGWCRVRNPSRG 401

Query: 242 MKVLEEMIERGHTPENFTYNTAIDAFCRSGMVSEAVALFEFMRTRGSTMSSPTAKTYTIM 63
           M+VLEEMIE GHTP++FTYNTAID+FC++GMV+EA  LFEFMRT+GSTMSSPTAKTY IM
Sbjct: 402 MRVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIM 461

Query: 62  IVALAQCDRMEECFKFIEDM 3
           I+AL Q DR EECFK I+DM
Sbjct: 462 ILALVQSDRTEECFKLIKDM 481



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 4/132 (3%)
 Frame = -1

Query: 410 PEINAFNLLLDSLCKCSLVEEAEAMF----VKAKSKVNPDANTYNILFFGWCRVRNPIRG 243
           P+   +N  +DS CK  +V EA  +F     K  +  +P A TY I+     +       
Sbjct: 415 PDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEEC 474

Query: 242 MKVLEEMIERGHTPENFTYNTAIDAFCRSGMVSEAVALFEFMRTRGSTMSSPTAKTYTIM 63
            K++++MI  G  P+  TY   I+  C +G V EA   ++F+   G+    P   TY   
Sbjct: 475 FKLIKDMINSGVLPDVSTYKQVIEGMCLAGKVEEA---YKFLEEMGNKGYRPDIVTYNCF 531

Query: 62  IVALAQCDRMEE 27
           +  L +  + EE
Sbjct: 532 LDVLCENKKSEE 543



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 2/132 (1%)
 Frame = -1

Query: 410 PEINAFNLLLDSLCKCSLVEEAEAMFVKAKSK-VNPDANTYNILFFGWCRVRNPIRGMKV 234
           P+++ +  +++ +C    VEEA     +  +K   PD  TYN      C  +     + +
Sbjct: 488 PDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENKKSEEALGL 547

Query: 233 LEEMIERGHTPENFTYNTAIDAFCRSGMVSEAVALFEFMRTRGSTMSSPTAKTYTIMIVA 54
              MIE G  P   T+N  I  F   G    A   +  M  RG    +    TY +MI  
Sbjct: 548 YGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDT---DTYCVMIEG 604

Query: 53  LAQCDRMEE-CF 21
           L  C++ME+ CF
Sbjct: 605 LFNCNKMEDACF 616


>ref|XP_002315827.1| predicted protein [Populus trichocarpa] gi|222864867|gb|EEF01998.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score =  230 bits (586), Expect = 1e-58
 Identities = 107/140 (76%), Positives = 124/140 (88%)
 Frame = -1

Query: 422 VKTQPEINAFNLLLDSLCKCSLVEEAEAMFVKAKSKVNPDANTYNILFFGWCRVRNPIRG 243
           VKTQPEINAFNLLLD+LCKC L E+AE +F + K+KV PDANTYN++FFGWCRVRNP RG
Sbjct: 132 VKTQPEINAFNLLLDALCKCCLAEDAEGLFKRVKNKVKPDANTYNVMFFGWCRVRNPTRG 191

Query: 242 MKVLEEMIERGHTPENFTYNTAIDAFCRSGMVSEAVALFEFMRTRGSTMSSPTAKTYTIM 63
           MKVLEEMI+ GHTP++FTY TAIDAFCR+GMV+EA  LFEFMRT+GSTMSSPTAKTY IM
Sbjct: 192 MKVLEEMIQLGHTPDSFTYITAIDAFCRAGMVNEAAELFEFMRTKGSTMSSPTAKTYAIM 251

Query: 62  IVALAQCDRMEECFKFIEDM 3
           I AL + +RM+ECFK +EDM
Sbjct: 252 IGALVRNNRMDECFKLLEDM 271



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 4/140 (2%)
 Frame = -1

Query: 410 PEINAFNLLLDSLCKCSLVEEAEAMF----VKAKSKVNPDANTYNILFFGWCRVRNPIRG 243
           P+   +   +D+ C+  +V EA  +F     K  +  +P A TY I+     R       
Sbjct: 205 PDSFTYITAIDAFCRAGMVNEAAELFEFMRTKGSTMSSPTAKTYAIMIGALVRNNRMDEC 264

Query: 242 MKVLEEMIERGHTPENFTYNTAIDAFCRSGMVSEAVALFEFMRTRGSTMSSPTAKTYTIM 63
            K+LE+MI  G  P+  T+   I+  C +G + EA   + F++  G+    P   TY   
Sbjct: 265 FKLLEDMINSGCLPDVSTFKELIEGMCSAGKIDEA---YRFLQEMGNKGYPPDIVTYNCF 321

Query: 62  IVALAQCDRMEECFKFIEDM 3
           +  L +    EE  +  E M
Sbjct: 322 LKVLCENKNSEEALRLYERM 341



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 1/137 (0%)
 Frame = -1

Query: 410 PEINAFNLLLDSLCKCSLVEEAEAMFVKAKSK-VNPDANTYNILFFGWCRVRNPIRGMKV 234
           P+++ F  L++ +C    ++EA     +  +K   PD  TYN      C  +N    +++
Sbjct: 278 PDVSTFKELIEGMCSAGKIDEAYRFLQEMGNKGYPPDIVTYNCFLKVLCENKNSEEALRL 337

Query: 233 LEEMIERGHTPENFTYNTAIDAFCRSGMVSEAVALFEFMRTRGSTMSSPTAKTYTIMIVA 54
            E MIE G  P   T+N  I  F   G    A   +  M  RG         TY +MI  
Sbjct: 338 YERMIEAGCFPSVQTHNMLISMFFEMGDPDGAFETWYEMDKRGCAQD---VDTYIVMIDG 394

Query: 53  LAQCDRMEECFKFIEDM 3
           L  C+++E+    IED+
Sbjct: 395 LFGCNKVEDACFLIEDI 411


>ref|XP_004138939.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like [Cucumis sativus]
          Length = 559

 Score =  220 bits (560), Expect = 1e-55
 Identities = 105/140 (75%), Positives = 119/140 (85%)
 Frame = -1

Query: 422 VKTQPEINAFNLLLDSLCKCSLVEEAEAMFVKAKSKVNPDANTYNILFFGWCRVRNPIRG 243
           VK QPEINAFNLLLD+LCKCSLVE+AEA+  K K K+ PDANTYNI+FFGWCRVRNP RG
Sbjct: 219 VKRQPEINAFNLLLDALCKCSLVEDAEALLKKVKKKLKPDANTYNIMFFGWCRVRNPGRG 278

Query: 242 MKVLEEMIERGHTPENFTYNTAIDAFCRSGMVSEAVALFEFMRTRGSTMSSPTAKTYTIM 63
           M+VLEEMIE G  P+NFTYNTAI +FC++GM+ EA  LFEFMRT+GS +SSPTAKTY IM
Sbjct: 279 MRVLEEMIELGFDPDNFTYNTAIASFCKAGMLKEACELFEFMRTKGSALSSPTAKTYAIM 338

Query: 62  IVALAQCDRMEECFKFIEDM 3
           IVAL    RMEECFKF+E M
Sbjct: 339 IVALVNNGRMEECFKFLEYM 358


>ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like [Glycine max]
          Length = 466

 Score =  218 bits (555), Expect = 4e-55
 Identities = 103/140 (73%), Positives = 121/140 (86%)
 Frame = -1

Query: 422 VKTQPEINAFNLLLDSLCKCSLVEEAEAMFVKAKSKVNPDANTYNILFFGWCRVRNPIRG 243
           VKTQ EINAFNLLLD+LCKC LVE+AE+++ K +  V P+A TYNIL FGWCRVRNP RG
Sbjct: 126 VKTQLEINAFNLLLDALCKCCLVEDAESLYKKMRKTVKPNAETYNILVFGWCRVRNPTRG 185

Query: 242 MKVLEEMIERGHTPENFTYNTAIDAFCRSGMVSEAVALFEFMRTRGSTMSSPTAKTYTIM 63
           MK+LEEMIE GH P+NFTYNTAID +C++GM++EAV LFEFMRT+GST+SSPTAKTY I+
Sbjct: 186 MKLLEEMIELGHRPDNFTYNTAIDTYCKTGMITEAVDLFEFMRTKGSTISSPTAKTYAII 245

Query: 62  IVALAQCDRMEECFKFIEDM 3
           IVALAQ DRME+CFK I  M
Sbjct: 246 IVALAQHDRMEDCFKLIGHM 265



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 1/137 (0%)
 Frame = -1

Query: 410 PEINAFNLLLDSLCKCSLVEEAEAMFVKAKSK-VNPDANTYNILFFGWCRVRNPIRGMKV 234
           P++  +  +++ +C C  ++EA     +  +K   PD  TYN      C  +     +K+
Sbjct: 272 PDVTTYKEIIEGMCMCGKIDEAYKFLEEMGNKSYRPDIVTYNCFLKVLCDNKKSEDALKL 331

Query: 233 LEEMIERGHTPENFTYNTAIDAFCRSGMVSEAVALFEFMRTRGSTMSSPTAKTYTIMIVA 54
              MIE    P   TYN  I  F        A   ++ +  RG     P   TY +MI  
Sbjct: 332 YGRMIELNCIPSVQTYNMLISMFFEMDDPDGAFETWQEIDNRG---CRPDTDTYCVMIEG 388

Query: 53  LAQCDRMEECFKFIEDM 3
           L  C++ME+    +E++
Sbjct: 389 LFNCNKMEDACFLLEEV 405