BLASTX nr result

ID: Cimicifuga21_contig00032113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032113
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36968.3| unnamed protein product [Vitis vinifera]               63   2e-08
ref|XP_002271259.1| PREDICTED: stachyose synthase [Vitis vinifera]     63   2e-08
ref|XP_004135984.1| PREDICTED: stachyose synthase-like [Cucumis ...    60   2e-07
gb|ABV44498.1| stachyose synthetase variant 1 [Cucumis sativus] ...    60   2e-07
ref|XP_002320969.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06

>emb|CBI36968.3| unnamed protein product [Vitis vinifera]
          Length = 792

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/61 (49%), Positives = 42/61 (68%)
 Frame = -2

Query: 184 YFELTDTKLNLKGVALLSQIPNNVXXXXXXXXXXXXNAPLSLFQKVQSLAYKGGFLGFTQ 5
           YF+L++ K ++KGV LLS++P+NV            NAPL L Q+VQS++YKGGF GF +
Sbjct: 23  YFDLSNGKFSIKGVPLLSEVPSNVTFSSFSSISQSSNAPLHLLQRVQSMSYKGGFFGFAK 82

Query: 4   E 2
           E
Sbjct: 83  E 83


>ref|XP_002271259.1| PREDICTED: stachyose synthase [Vitis vinifera]
          Length = 865

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/61 (49%), Positives = 42/61 (68%)
 Frame = -2

Query: 184 YFELTDTKLNLKGVALLSQIPNNVXXXXXXXXXXXXNAPLSLFQKVQSLAYKGGFLGFTQ 5
           YF+L++ K ++KGV LLS++P+NV            NAPL L Q+VQS++YKGGF GF +
Sbjct: 23  YFDLSNGKFSIKGVPLLSEVPSNVTFSSFSSISQSSNAPLHLLQRVQSMSYKGGFFGFAK 82

Query: 4   E 2
           E
Sbjct: 83  E 83


>ref|XP_004135984.1| PREDICTED: stachyose synthase-like [Cucumis sativus]
           gi|449518509|ref|XP_004166284.1| PREDICTED: stachyose
           synthase-like [Cucumis sativus]
           gi|148251494|gb|ABQ53598.1| stachyose synthase [Cucumis
           sativus]
          Length = 864

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/63 (44%), Positives = 40/63 (63%)
 Frame = -2

Query: 193 MNNYFELTDTKLNLKGVALLSQIPNNVXXXXXXXXXXXXNAPLSLFQKVQSLAYKGGFLG 14
           + N  + +D K+++KGV +LS++P NV            +APL L Q+V SL+YKGGFLG
Sbjct: 20  LENLIDFSDGKISVKGVPVLSEVPTNVFFSPFSSISQSSDAPLPLLQRVHSLSYKGGFLG 79

Query: 13  FTQ 5
           F Q
Sbjct: 80  FDQ 82


>gb|ABV44498.1| stachyose synthetase variant 1 [Cucumis sativus]
           gi|157326773|gb|ABV44499.1| stachyose synthetase variant
           2 [Cucumis sativus] gi|157326775|gb|ABV44500.1|
           stachyose synthetase variant 3 [Cucumis sativus]
          Length = 864

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/63 (44%), Positives = 40/63 (63%)
 Frame = -2

Query: 193 MNNYFELTDTKLNLKGVALLSQIPNNVXXXXXXXXXXXXNAPLSLFQKVQSLAYKGGFLG 14
           + N  + +D K+++KGV +LS++P NV            +APL L Q+V SL+YKGGFLG
Sbjct: 20  LENLIDFSDGKISVKGVPVLSEVPTNVFFSPFSSISQSSDAPLPLLQRVHSLSYKGGFLG 79

Query: 13  FTQ 5
           F Q
Sbjct: 80  FDQ 82


>ref|XP_002320969.1| predicted protein [Populus trichocarpa] gi|222861742|gb|EEE99284.1|
           predicted protein [Populus trichocarpa]
          Length = 867

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
 Frame = -2

Query: 190 NNYFELTDTKLNLKGVALLSQIPNNVXXXXXXXXXXXXN-APLSLFQKVQSLAYKGGFLG 14
           + YF+L++ KL++KG  LLS++P+NV              APL+L Q+VQ+L++KGGFLG
Sbjct: 22  DKYFDLSNGKLSVKGFPLLSEVPSNVTFAPLFSSICKPPDAPLALLQRVQALSHKGGFLG 81

Query: 13  FTQE 2
           F +E
Sbjct: 82  FHKE 85


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