BLASTX nr result

ID: Cimicifuga21_contig00032094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032094
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528340.1| ATP binding protein, putative [Ricinus commu...   280   8e-74
ref|XP_002314510.1| predicted protein [Populus trichocarpa] gi|2...   279   2e-73
gb|AFW58800.1| DNA mismatch repair protein [Zea mays]                 276   1e-72
ref|NP_001105898.1| DNA mismatch repair protein [Zea mays] gi|61...   275   5e-72
emb|CBI23729.3| unnamed protein product [Vitis vinifera]              274   8e-72

>ref|XP_002528340.1| ATP binding protein, putative [Ricinus communis]
           gi|223532208|gb|EEF34012.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 937

 Score =  280 bits (717), Expect = 8e-74
 Identities = 135/185 (72%), Positives = 151/185 (81%)
 Frame = +2

Query: 2   TFSEEDGLTEEAIVTKLRTCRYHHLFLHASLKNNSSGTCRXXXXXXXXXXXXXCRGRPFE 181
           T+S EDGLTEEA+VTKLRTCRYHHLFLHASL++NSSGTCR             C  R FE
Sbjct: 272 TYSSEDGLTEEALVTKLRTCRYHHLFLHASLRHNSSGTCRWGEFGEGGLLWGECNARHFE 331

Query: 182 WFDGNPVTHLLCKVRELYGLDQEVTFRNVTVSLEKRPRPLHLGTATQIGTIPTEGIPSLL 361
           WF+G+P T LL KVRELYGLD  +TFRNVTV  + RPRPLHLGTATQIG IPTEGIP LL
Sbjct: 332 WFEGDPFTELLFKVRELYGLDDGITFRNVTVPSDNRPRPLHLGTATQIGAIPTEGIPCLL 391

Query: 362 KVLFPSNSSGLPVLYIRDLLLNPPTFEIALAIQATCKLMSNVACSIPEFTCVSAAKLVKL 541
           KVL PSN +GLPVLY+RDLLLNPP +EIA  IQATCKLMS++ CSIPEFTC+S+AKLVKL
Sbjct: 392 KVLLPSNCTGLPVLYVRDLLLNPPAYEIASTIQATCKLMSSITCSIPEFTCISSAKLVKL 451

Query: 542 LESKE 556
           LE +E
Sbjct: 452 LELRE 456


>ref|XP_002314510.1| predicted protein [Populus trichocarpa] gi|222863550|gb|EEF00681.1|
           predicted protein [Populus trichocarpa]
          Length = 1130

 Score =  279 bits (714), Expect = 2e-73
 Identities = 136/185 (73%), Positives = 151/185 (81%)
 Frame = +2

Query: 2   TFSEEDGLTEEAIVTKLRTCRYHHLFLHASLKNNSSGTCRXXXXXXXXXXXXXCRGRPFE 181
           T+S EDGLTEEA+VTKLRTC+YHHLFLH+SL++NSSGTCR             C GR FE
Sbjct: 269 TYSLEDGLTEEALVTKLRTCQYHHLFLHSSLRHNSSGTCRWGEYGRGGLLWGECNGRYFE 328

Query: 182 WFDGNPVTHLLCKVRELYGLDQEVTFRNVTVSLEKRPRPLHLGTATQIGTIPTEGIPSLL 361
           WF+G+PVT LL KVRELYGLD +V FRN  VS E RPRPLHLGTATQIG IPTEGIP LL
Sbjct: 329 WFEGDPVTELLFKVRELYGLDDKVGFRNAYVSSENRPRPLHLGTATQIGAIPTEGIPCLL 388

Query: 362 KVLFPSNSSGLPVLYIRDLLLNPPTFEIALAIQATCKLMSNVACSIPEFTCVSAAKLVKL 541
           KVL PSN +GLP LY+RD+LLNPP +EIA  IQATCKLMSN+ CSIPEFTCVS+AKLVKL
Sbjct: 389 KVLLPSNCTGLPELYVRDMLLNPPAYEIASTIQATCKLMSNITCSIPEFTCVSSAKLVKL 448

Query: 542 LESKE 556
           LE KE
Sbjct: 449 LEQKE 453


>gb|AFW58800.1| DNA mismatch repair protein [Zea mays]
          Length = 1131

 Score =  276 bits (707), Expect = 1e-72
 Identities = 131/185 (70%), Positives = 151/185 (81%)
 Frame = +2

Query: 2   TFSEEDGLTEEAIVTKLRTCRYHHLFLHASLKNNSSGTCRXXXXXXXXXXXXXCRGRPFE 181
           T+S E+GLTEEAIVTKLR CRYHHL+LH SLKNNSSGT R             C G+ FE
Sbjct: 265 TYSAEEGLTEEAIVTKLRICRYHHLYLHNSLKNNSSGTSRWGEFGEGGLLWGECSGKSFE 324

Query: 182 WFDGNPVTHLLCKVRELYGLDQEVTFRNVTVSLEKRPRPLHLGTATQIGTIPTEGIPSLL 361
           WFDG+P+  LLCKVRE+YGLD++  FR+VTVSLE RP+PLHLGTATQIG IPTEGIPSLL
Sbjct: 325 WFDGSPIQELLCKVREIYGLDEKTVFRDVTVSLEGRPQPLHLGTATQIGVIPTEGIPSLL 384

Query: 362 KVLFPSNSSGLPVLYIRDLLLNPPTFEIALAIQATCKLMSNVACSIPEFTCVSAAKLVKL 541
           +++ PSN  GLP +YIRDLLLNPP+FE+A AIQ  C+LM N+ CSIPEFTC+SAAKLVKL
Sbjct: 385 RMVLPSNCGGLPSMYIRDLLLNPPSFEVAAAIQEACRLMGNITCSIPEFTCISAAKLVKL 444

Query: 542 LESKE 556
           LESKE
Sbjct: 445 LESKE 449


>ref|NP_001105898.1| DNA mismatch repair protein [Zea mays] gi|61696671|gb|AAX53096.1|
           DNA mismatch repair protein [Zea mays]
          Length = 1131

 Score =  275 bits (702), Expect = 5e-72
 Identities = 130/184 (70%), Positives = 150/184 (81%)
 Frame = +2

Query: 2   TFSEEDGLTEEAIVTKLRTCRYHHLFLHASLKNNSSGTCRXXXXXXXXXXXXXCRGRPFE 181
           T+S E+GLTEEAIVTKLR CRYHHL+LH SLKNNSSGT R             C G+ FE
Sbjct: 265 TYSAEEGLTEEAIVTKLRICRYHHLYLHNSLKNNSSGTSRWGEFGEGGLLWGECSGKSFE 324

Query: 182 WFDGNPVTHLLCKVRELYGLDQEVTFRNVTVSLEKRPRPLHLGTATQIGTIPTEGIPSLL 361
           WFDG+P+  LLCKVRE+YGLD++  FR+VTVSLE RP+PLHLGTATQIG IPTEGIPSLL
Sbjct: 325 WFDGSPIQELLCKVREIYGLDEKTVFRDVTVSLEGRPQPLHLGTATQIGVIPTEGIPSLL 384

Query: 362 KVLFPSNSSGLPVLYIRDLLLNPPTFEIALAIQATCKLMSNVACSIPEFTCVSAAKLVKL 541
           +++ PSN  GLP +YIRDLLLNPP+FE+A AIQ  C+LM N+ CSIPEFTC+SAAKLVKL
Sbjct: 385 RMVLPSNCGGLPSMYIRDLLLNPPSFEVAAAIQEACRLMGNITCSIPEFTCISAAKLVKL 444

Query: 542 LESK 553
           LESK
Sbjct: 445 LESK 448


>emb|CBI23729.3| unnamed protein product [Vitis vinifera]
          Length = 1114

 Score =  274 bits (700), Expect = 8e-72
 Identities = 134/185 (72%), Positives = 148/185 (80%)
 Frame = +2

Query: 2   TFSEEDGLTEEAIVTKLRTCRYHHLFLHASLKNNSSGTCRXXXXXXXXXXXXXCRGRPFE 181
           TFS EDGLTEEA+VTKLRTC YHHL LH SL+ NSSGTCR             C  R FE
Sbjct: 269 TFSVEDGLTEEALVTKLRTCHYHHLLLHTSLRRNSSGTCRWGEFGEGGLLWGECSARHFE 328

Query: 182 WFDGNPVTHLLCKVRELYGLDQEVTFRNVTVSLEKRPRPLHLGTATQIGTIPTEGIPSLL 361
           WF+G+PV+ LL KV+ELYG D +VTFRNVTVS EKRPR LHLGTATQIG IPTEGIP LL
Sbjct: 329 WFEGDPVSQLLFKVKELYGFDDQVTFRNVTVSSEKRPRSLHLGTATQIGAIPTEGIPCLL 388

Query: 362 KVLFPSNSSGLPVLYIRDLLLNPPTFEIALAIQATCKLMSNVACSIPEFTCVSAAKLVKL 541
           KVL PSN +GLP+LY+RDLLLNPP +EIA  IQATC+LM+NV CSIPEFTCVS AKLVKL
Sbjct: 389 KVLLPSNCTGLPLLYVRDLLLNPPAYEIASIIQATCRLMNNVTCSIPEFTCVSPAKLVKL 448

Query: 542 LESKE 556
           LE +E
Sbjct: 449 LELRE 453


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