BLASTX nr result

ID: Cimicifuga21_contig00032073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032073
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511058.1| tyrosyl-DNA phosphodiesterase, putative [Ric...    76   2e-12
emb|CAN67540.1| hypothetical protein VITISV_012382 [Vitis vinifera]    72   6e-11
ref|XP_002283806.2| PREDICTED: uncharacterized protein LOC100243...    71   8e-11
emb|CBI20080.3| unnamed protein product [Vitis vinifera]               71   8e-11
ref|XP_002318192.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10

>ref|XP_002511058.1| tyrosyl-DNA phosphodiesterase, putative [Ricinus communis]
            gi|223550173|gb|EEF51660.1| tyrosyl-DNA
            phosphodiesterase, putative [Ricinus communis]
          Length = 1148

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 40/76 (52%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
 Frame = -2

Query: 437  NYSLGSRLHICNYELGIIFIVPPXXXXXXXXXXXXI----TLPFVLPAPKYRPNDRPASK 270
            N S G RLH+CNYELGIIF+ PP                  LPFV+PAPKY P D PA+K
Sbjct: 1021 NLSSGLRLHVCNYELGIIFVFPPSRTKGIDNKDAATLDDVVLPFVVPAPKYGPTDWPATK 1080

Query: 269  KAMREAVNERAELEKE 222
            KAMREA+ E  + E+E
Sbjct: 1081 KAMREALIELNDQERE 1096


>emb|CAN67540.1| hypothetical protein VITISV_012382 [Vitis vinifera]
          Length = 1423

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 46/122 (37%), Positives = 53/122 (43%), Gaps = 4/122 (3%)
 Frame = -2

Query: 419  RLHICNYELGIIFIVPPXXXXXXXXXXXXI----TLPFVLPAPKYRPNDRPASKKAMREA 252
            RLHICNYELGIIFI PP                  LPFV+PAPKY P DRPA+ +AM EA
Sbjct: 1301 RLHICNYELGIIFIFPPSATKGNGNQSSTNLDDVVLPFVMPAPKYGPRDRPATTQAMTEA 1360

Query: 251  VNERAELEKEIVNEQEVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALWSQVDSA 72
            + E  E E E +                                        LWSQVDS+
Sbjct: 1361 LAELTEQEHEKLAAATNTEEMIEEELPDEEEAVEVTDHVAEEKEEEKAYAELLWSQVDSS 1420

Query: 71   ES 66
            +S
Sbjct: 1421 QS 1422


>ref|XP_002283806.2| PREDICTED: uncharacterized protein LOC100243589 [Vitis vinifera]
          Length = 1091

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/70 (54%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
 Frame = -2

Query: 419  RLHICNYELGIIFIVPPXXXXXXXXXXXXI----TLPFVLPAPKYRPNDRPASKKAMREA 252
            RLHICNYELGIIFI PP                  LPFV+PAPKY P DRPA+ +AM EA
Sbjct: 969  RLHICNYELGIIFIFPPSATKGNGNQSSTNLDDVVLPFVMPAPKYGPRDRPATTQAMTEA 1028

Query: 251  VNERAELEKE 222
            + E  E E E
Sbjct: 1029 LAELTEQEHE 1038


>emb|CBI20080.3| unnamed protein product [Vitis vinifera]
          Length = 1032

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/70 (54%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
 Frame = -2

Query: 419  RLHICNYELGIIFIVPPXXXXXXXXXXXXI----TLPFVLPAPKYRPNDRPASKKAMREA 252
            RLHICNYELGIIFI PP                  LPFV+PAPKY P DRPA+ +AM EA
Sbjct: 910  RLHICNYELGIIFIFPPSATKGNGNQSSTNLDDVVLPFVMPAPKYGPRDRPATTQAMTEA 969

Query: 251  VNERAELEKE 222
            + E  E E E
Sbjct: 970  LAELTEQEHE 979


>ref|XP_002318192.1| predicted protein [Populus trichocarpa] gi|222858865|gb|EEE96412.1|
            predicted protein [Populus trichocarpa]
          Length = 1131

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 39/83 (46%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
 Frame = -2

Query: 437  NYSLGSRLHICNYELGIIFIVPPXXXXXXXXXXXXI----TLPFVLPAPKYRPNDRPASK 270
            N  L SRLH+ NYELGIIF  PP                  LPF +PAPKY P DRPA+ 
Sbjct: 1007 NTYLSSRLHVSNYELGIIFTFPPTETKGITNKDCTNLDDIVLPFAVPAPKYGPTDRPATA 1066

Query: 269  KAMREAVNERAELEKEIVNEQEV 201
            +AM EAV E A LE++ +  +E+
Sbjct: 1067 RAMSEAVAELAGLERDRLIAEEM 1089


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