BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032068
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282100.2| PREDICTED: DNA repair and recombination prot...   300   2e-79
emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera]   298   6e-79
emb|CBI32424.3| unnamed protein product [Vitis vinifera]              295   9e-78
ref|XP_002518776.1| DNA repair and recombination protein RAD54B,...   288   9e-76
ref|XP_004140701.1| PREDICTED: DNA repair and recombination prot...   281   8e-74

>ref|XP_002282100.2| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
           vinifera]
          Length = 934

 Score =  300 bits (769), Expect = 2e-79
 Identities = 161/247 (65%), Positives = 182/247 (73%), Gaps = 3/247 (1%)
 Frame = -2

Query: 734 EEDDEVSTASNPSDSSXXXXXXXXXXXXXXXXXXXXXS--PPSEEENRKSQNVDALVRGN 561
           E D+EV ++S+PSDSS                     +   P+ +E RKSQNVDAL+RGN
Sbjct: 3   EYDEEVPSSSDPSDSSDEFAGESEEEEEEENDDEERSAVKSPTSDEGRKSQNVDALLRGN 62

Query: 560 LVVRRQPLIPRVLSVSDGAAVARKPFKPPCSNGYSDNNEALGRRLWARKRFVPWGSSRPV 381
           LV+RRQ L+PRVLSV+DGAAVARKPFKPP SNGY D N+ L  RLWARKRFVPWGSSRP 
Sbjct: 63  LVLRRQSLLPRVLSVTDGAAVARKPFKPPFSNGYHDRNDQLVHRLWARKRFVPWGSSRPA 122

Query: 380 LIPITNRLEVPNTVEKVVPEETV-LPPGIEPLVLWQPEESGEECRNSAPIVVDPLLVRFL 204
           L+ ITNR+ + +  EK V EE+V LP GI+PLVLW PEES E+  N  PIVVDPLLVRFL
Sbjct: 123 LVLITNRVNISSAAEKDVLEESVSLPAGIDPLVLWHPEESEEQADNLMPIVVDPLLVRFL 182

Query: 203 RPHQREGVQFMFECVXXXXXXXXXXXXXLADDMGLGKTLQSITLLYTLLRQGFDGEPMVK 24
           RPHQREGVQFMF+CV             LADDMGLGKTLQSITLLYTLLRQGFDG+ MVK
Sbjct: 183 RPHQREGVQFMFDCVSGLSSTANISGCILADDMGLGKTLQSITLLYTLLRQGFDGKAMVK 242

Query: 23  KAIIVTP 3
           KAIIVTP
Sbjct: 243 KAIIVTP 249


>emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera]
          Length = 985

 Score =  298 bits (764), Expect = 6e-79
 Identities = 160/247 (64%), Positives = 181/247 (73%), Gaps = 3/247 (1%)
 Frame = -2

Query: 734 EEDDEVSTASNPSDSSXXXXXXXXXXXXXXXXXXXXXS--PPSEEENRKSQNVDALVRGN 561
           E D++V ++S+PSDSS                     +   P+ +E RKSQNVDAL+RGN
Sbjct: 3   EYDEDVPSSSDPSDSSDEFAGESEEEEEEENDDEERSAVKSPTSDEGRKSQNVDALLRGN 62

Query: 560 LVVRRQPLIPRVLSVSDGAAVARKPFKPPCSNGYSDNNEALGRRLWARKRFVPWGSSRPV 381
           LVVRRQ L+PRVLSV+DGAAVARKPFKPP SNGY D N+ L  RLWARKRFVPWGSSRP 
Sbjct: 63  LVVRRQSLLPRVLSVTDGAAVARKPFKPPFSNGYHDRNDQLVHRLWARKRFVPWGSSRPA 122

Query: 380 LIPITNRLEVPNTVEKVVPEETV-LPPGIEPLVLWQPEESGEECRNSAPIVVDPLLVRFL 204
           L+ ITN + + +  EK V EE+V LP GI+PLVLW PEES E+  N  PIVVDPLLVRFL
Sbjct: 123 LVLITNCVNISSAAEKDVLEESVSLPAGIDPLVLWHPEESEEQADNLMPIVVDPLLVRFL 182

Query: 203 RPHQREGVQFMFECVXXXXXXXXXXXXXLADDMGLGKTLQSITLLYTLLRQGFDGEPMVK 24
           RPHQREGVQFMF+CV             LADDMGLGKTLQSITLLYTLL QGFDG+PMVK
Sbjct: 183 RPHQREGVQFMFDCVSGLSSTVNISGCILADDMGLGKTLQSITLLYTLLHQGFDGKPMVK 242

Query: 23  KAIIVTP 3
           KAIIVTP
Sbjct: 243 KAIIVTP 249


>emb|CBI32424.3| unnamed protein product [Vitis vinifera]
          Length = 1112

 Score =  295 bits (754), Expect = 9e-78
 Identities = 151/206 (73%), Positives = 167/206 (81%), Gaps = 1/206 (0%)
 Frame = -2

Query: 617 PSEEENRKSQNVDALVRGNLVVRRQPLIPRVLSVSDGAAVARKPFKPPCSNGYSDNNEAL 438
           P+ +E RKSQNVDAL+RGNLV+RRQ L+PRVLSV+DGAAVARKPFKPP SNGY D N+ L
Sbjct: 38  PTSDEGRKSQNVDALLRGNLVLRRQSLLPRVLSVTDGAAVARKPFKPPFSNGYHDRNDQL 97

Query: 437 GRRLWARKRFVPWGSSRPVLIPITNRLEVPNTVEKVVPEETV-LPPGIEPLVLWQPEESG 261
             RLWARKRFVPWGSSRP L+ ITNR+ + +  EK V EE+V LP GI+PLVLW PEES 
Sbjct: 98  VHRLWARKRFVPWGSSRPALVLITNRVNISSAAEKDVLEESVSLPAGIDPLVLWHPEESE 157

Query: 260 EECRNSAPIVVDPLLVRFLRPHQREGVQFMFECVXXXXXXXXXXXXXLADDMGLGKTLQS 81
           E+  N  PIVVDPLLVRFLRPHQREGVQFMF+CV             LADDMGLGKTLQS
Sbjct: 158 EQADNLMPIVVDPLLVRFLRPHQREGVQFMFDCVSGLSSTANISGCILADDMGLGKTLQS 217

Query: 80  ITLLYTLLRQGFDGEPMVKKAIIVTP 3
           ITLLYTLLRQGFDG+ MVKKAIIVTP
Sbjct: 218 ITLLYTLLRQGFDGKAMVKKAIIVTP 243


>ref|XP_002518776.1| DNA repair and recombination protein RAD54B, putative [Ricinus
           communis] gi|223542157|gb|EEF43701.1| DNA repair and
           recombination protein RAD54B, putative [Ricinus
           communis]
          Length = 940

 Score =  288 bits (737), Expect = 9e-76
 Identities = 156/247 (63%), Positives = 178/247 (72%), Gaps = 2/247 (0%)
 Frame = -2

Query: 737 MEEDDEVSTASNPSDSSXXXXXXXXXXXXXXXXXXXXXSPPSEEENRKSQNVDALVRGNL 558
           MEE++E     +PSDSS                       PS+EE  KS+NVDALVRGNL
Sbjct: 12  MEEEEEEEEILSPSDSSEDYALDEEEGDDDDVDVVQAAQSPSDEE-LKSKNVDALVRGNL 70

Query: 557 VVRRQPLIPRVLSVSDGAAVARKPFKPPCSNGYSDNNEALGRRLWARKRFVPWGSSRPVL 378
           VV+RQ L+PRVLSV++GAA+ RKPFKPP SNGY D N+ L RRL ARKRFVPWGSSRPVL
Sbjct: 71  VVKRQSLLPRVLSVTEGAAICRKPFKPPSSNGYKDGNQQLSRRLLARKRFVPWGSSRPVL 130

Query: 377 IPITNRLEVPNTVEK-VVPEETV-LPPGIEPLVLWQPEESGEECRNSAPIVVDPLLVRFL 204
           +PITNR+ V +  EK VV E+TV LPPGI+PLVLWQP+E      N  PI+VD LLV+FL
Sbjct: 131 LPITNRINVSSPFEKDVVVEDTVTLPPGIDPLVLWQPDECDSTAGNFIPIIVDSLLVQFL 190

Query: 203 RPHQREGVQFMFECVXXXXXXXXXXXXXLADDMGLGKTLQSITLLYTLLRQGFDGEPMVK 24
           RPHQREGVQFMF+CV             LADDMGLGKTLQSITLLYTLL QGFD +PMV+
Sbjct: 191 RPHQREGVQFMFDCVSGLHSAANINGCILADDMGLGKTLQSITLLYTLLGQGFDDKPMVR 250

Query: 23  KAIIVTP 3
           KAIIVTP
Sbjct: 251 KAIIVTP 257


>ref|XP_004140701.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis
           sativus] gi|449497618|ref|XP_004160452.1| PREDICTED: DNA
           repair and recombination protein RAD54-like [Cucumis
           sativus]
          Length = 928

 Score =  281 bits (720), Expect = 8e-74
 Identities = 153/248 (61%), Positives = 173/248 (69%), Gaps = 3/248 (1%)
 Frame = -2

Query: 737 MEEDDEVSTASNPSDSSXXXXXXXXXXXXXXXXXXXXXSP--PSEEENRKSQNVDALVRG 564
           ME++DE+  AS+ SDSS                     S   PS +E+ KS+NVDAL+RG
Sbjct: 1   MEDEDEIVPASDSSDSSDDYIDINGEAFQDEDDEEEQSSSLSPSSDEDLKSKNVDALLRG 60

Query: 563 NLVVRRQPLIPRVLSVSDGAAVARKPFKPPCSNGYSDNNEALGRRLWARKRFVPWGSSRP 384
           NLVVRRQ L+PRVLSV++GAAV RKPFKPPCS+GY + N  L RRLWARKRFVPWGS +P
Sbjct: 61  NLVVRRQSLLPRVLSVAEGAAVCRKPFKPPCSSGYDERNNQLARRLWARKRFVPWGSLKP 120

Query: 383 VLIPITNRLEVPNTVEKVVPEETV-LPPGIEPLVLWQPEESGEECRNSAPIVVDPLLVRF 207
               I   L +P   E    EE+V LPPGI+PLVLWQPE+S     N A I VDPLLVRF
Sbjct: 121 ASSVIATNLFLPKAAENDAVEESVTLPPGIDPLVLWQPEDSELNVTNLASITVDPLLVRF 180

Query: 206 LRPHQREGVQFMFECVXXXXXXXXXXXXXLADDMGLGKTLQSITLLYTLLRQGFDGEPMV 27
           LRPHQREGVQFMFECV             LADDMGLGKTLQSI+LLYTLL QGFDG+PMV
Sbjct: 181 LRPHQREGVQFMFECVSGLHKGTDIFGCILADDMGLGKTLQSISLLYTLLCQGFDGKPMV 240

Query: 26  KKAIIVTP 3
           KKAIIVTP
Sbjct: 241 KKAIIVTP 248