BLASTX nr result

ID: Cimicifuga21_contig00032055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032055
         (190 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containi...    56   4e-06
ref|XP_002328418.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
           gi|297735515|emb|CBI17955.3| unnamed protein product
           [Vitis vinifera]
          Length = 627

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 27/62 (43%), Positives = 41/62 (66%)
 Frame = -2

Query: 189 GVAPDDRTFNIMVRGFLKKKDIHKAVQFLNAMLEKRFSADAETLSMIVNLPVEDESNRET 10
           G AP+  TFN ++RGF +  ++ K V+ L  M EK FS DA T+S++V+L  +DE  RE 
Sbjct: 548 GCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREY 607

Query: 9   IN 4
           ++
Sbjct: 608 LH 609


>ref|XP_002328418.1| predicted protein [Populus trichocarpa] gi|222838133|gb|EEE76498.1|
           predicted protein [Populus trichocarpa]
          Length = 122

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/56 (42%), Positives = 39/56 (69%)
 Frame = -2

Query: 189 GVAPDDRTFNIMVRGFLKKKDIHKAVQFLNAMLEKRFSADAETLSMIVNLPVEDES 22
           G  PD  ++N++++GFLK +D   AVQ ++ M+ KRFSAD+ T  M+++L   DE+
Sbjct: 25  GFLPDSCSYNVIIQGFLKNQDSSTAVQLIDEMVGKRFSADSSTFQMLLDLESYDEA 80


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