BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032035
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]    65   4e-09
gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]          65   6e-09
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    62   5e-08
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...    61   8e-08
gb|EEE66057.1| hypothetical protein OsJ_22054 [Oryza sativa Japo...    60   1e-07

>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/94 (37%), Positives = 50/94 (53%)
 Frame = +1

Query: 22   WSIGHGLTVNAWEDFWIPGTPISLPLLNKPADCNLVAVADFIVLGLRLWNHDLVRRWWPK 201
            WSI  G  V  W D W+P +   L +    AD + + V + I  GL  W+ D +R  +  
Sbjct: 1479 WSIASGTKVQVWGDSWLPNSSNRLIITPHVADFDGIKVDELITKGL--WHEDFIRDKFMG 1536

Query: 202  LYADRILSLPLSKFHRQDKLVWTGDKYGEYTVKS 303
              AD ILS+PL    R+D++ W+ D  GEYT +S
Sbjct: 1537 RDADLILSIPLPMSSREDQISWSFDARGEYTARS 1570


>gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]
          Length = 593

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 40/101 (39%), Positives = 50/101 (49%)
 Frame = +1

Query: 1   LLWARSRWSIGHGLTVNAWEDFWIPGTPISLPLLNKPADCNLVAVADFIVLGLRLWNHDL 180
           LL     W IG G TV  W D WIPG+   LP  + P       V+DFI  G   WN +L
Sbjct: 157 LLQKGIEWRIGQGNTVRTWSDPWIPGSDTGLPKYHSPGSDLYTHVSDFIQNG--GWNENL 214

Query: 181 VRRWWPKLYADRILSLPLSKFHRQDKLVWTGDKYGEYTVKS 303
           +R  + +    RIL + LS     D + W   K GEYTV+S
Sbjct: 215 LRLCFEEEDVTRILQIRLSLRRPLDMVRWKFIKDGEYTVRS 255


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/94 (36%), Positives = 48/94 (51%)
 Frame = +1

Query: 22  WSIGHGLTVNAWEDFWIPGTPISLPLLNKPADCNLVAVADFIVLGLRLWNHDLVRRWWPK 201
           WSI  G  V  W D W+P +   L +    A  + + V + I  GL  W  D +R  +  
Sbjct: 392 WSIASGTKVQVWGDSWLPDSSNRLIITPPVAGFDGIKVDELITEGL--WREDFIRDKFMA 449

Query: 202 LYADRILSLPLSKFHRQDKLVWTGDKYGEYTVKS 303
             AD ILS+PL    R+D++ W+ D  GEYT +S
Sbjct: 450 RDADLILSIPLPMSSREDQISWSFDARGEYTARS 483


>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
            gi|7267666|emb|CAB78094.1| RNA-directed DNA
            polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
 Frame = +1

Query: 22   WSIGHGLTVNAWEDFWI----PGTPISLPL-LNKPADCNLVAVADFIVLGLRLWNHDLVR 186
            WSIG G ++N W + W+    P TPI  P   NK      ++V D I   ++ WN + +R
Sbjct: 859  WSIGQGDSINVWTEAWLSPSSPQTPIGPPTETNKD-----LSVHDLICHDVKSWNVEAIR 913

Query: 187  RWWPKLYADRILSLPLSKFHRQDKLVWTGDKYGEYTVKS 303
            +  P+ Y D+I  + ++    QD LVW   K GEYT K+
Sbjct: 914  KHLPQ-YEDQIRKITINALPLQDSLVWLPVKSGEYTTKT 951


>gb|EEE66057.1| hypothetical protein OsJ_22054 [Oryza sativa Japonica Group]
          Length = 940

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
 Frame = +1

Query: 19  RWSIGHGLTVNAWEDFWIPGTPISL--PLLNKPADCNLVAVADFIV-LGLRLWNHDLVRR 189
           RW IG+G +V   +D WIPG   S+  PLL  P D  +    DF+V   +  W+ D V  
Sbjct: 496 RWGIGNGSSVKILKDHWIPGIKPSMVRPLLPMPDDVTV----DFLVNAAIGEWDEDKVFS 551

Query: 190 WWPKLYADRILSLPLSKFHRQDKLVWTGDKYGEYTVKSA 306
           ++ +  A +IL +P+S    +D + W  DK G ++V+SA
Sbjct: 552 FFDETTAQQILQIPVSAHGGEDFISWPHDKRGVFSVRSA 590