BLASTX nr result

ID: Cimicifuga21_contig00032013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032013
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513467.1| ubiquitin-protein ligase, putative [Ricinus ...    59   3e-07
emb|CBI26021.3| unnamed protein product [Vitis vinifera]               57   2e-06
emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera]    57   2e-06

>ref|XP_002513467.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223547375|gb|EEF48870.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 464

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/61 (45%), Positives = 42/61 (68%)
 Frame = +1

Query: 85  INCWKLENLKITGKNLVLKYLTVAECYSLGKIEIDAVNLIKFKYYGIPVGLAFQNVPQLV 264
           +N   L +LK++G +L LKYL +  C +L  +EI A +L+ FKYYG  +GL F++VP LV
Sbjct: 215 VNSTSLVSLKVSGSSLKLKYLEMVCCNNLKYLEITAASLVSFKYYGPLIGLPFKSVPNLV 274

Query: 265 N 267
           +
Sbjct: 275 D 275


>emb|CBI26021.3| unnamed protein product [Vitis vinifera]
          Length = 487

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/85 (35%), Positives = 46/85 (54%)
 Frame = +1

Query: 7   LETVYLSDKNIEDIXXXXXXXXXXXXINCWKLENLKITGKNLVLKYLTVAECYSLGKIEI 186
           L+ V +SD+ ++D+              C  L NL  +  NL LK+L++  C+ L  IEI
Sbjct: 208 LQRVNISDQQLQDLLSTCSHLEWLSLCVCNGLVNLSFSALNLQLKFLSIKNCFRLETIEI 267

Query: 187 DAVNLIKFKYYGIPVGLAFQNVPQL 261
            A +L+ FKY G     +F+NVP+L
Sbjct: 268 HAADLVTFKYGGHLPSFSFKNVPKL 292


>emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera]
          Length = 1789

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/85 (35%), Positives = 46/85 (54%)
 Frame = +1

Query: 7    LETVYLSDKNIEDIXXXXXXXXXXXXINCWKLENLKITGKNLVLKYLTVAECYSLGKIEI 186
            L+ V +SD+ ++D+              C  L NL  +  NL LK+L++  C+ L  IEI
Sbjct: 1510 LQRVNISDQQLQDLLSTCSHLERLSLCVCNGLVNLSFSALNLQLKFLSIKNCFRLETIEI 1569

Query: 187  DAVNLIKFKYYGIPVGLAFQNVPQL 261
             A +L+ FKY G     +F+NVP+L
Sbjct: 1570 HAADLVTFKYGGHLPSFSFKNVPKL 1594


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